Pairwise Alignments

Query, 347 a.a., peptide ABC transporter ATP-binding protein from Burkholderia phytofirmans PsJN

Subject, 345 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  311 bits (797), Expect = 2e-89
 Identities = 173/346 (50%), Positives = 223/346 (64%), Gaps = 16/346 (4%)

Query: 2   NAPHVMA-PLVEVDHVSRRFVRRLNYAERIAGWLGARAEEQIVHAVDDVSLTIHRGEVLG 60
           NAP     PLV    ++R F     +  R+      R    ++HAVD VS +I RG+ L 
Sbjct: 10  NAPAAAGEPLVVAHDLARTFDVSPPWLNRVL----ERKPRVLLHAVDGVSFSIERGKTLA 65

Query: 61  LVGESGCGKSTLGRMLAGIGAPSSGSIRTLEKIAEQSAPGSEHDGTRAGKRTSRHRLATQ 120
           LVGESGCGKST+ R+L G+ AP+ G ++   + A  +   SE        R  R R+  Q
Sbjct: 66  LVGESGCGKSTVARLLVGLYAPTRGGLQFDGQDAHAAFKTSEG-------RKLRRRI--Q 116

Query: 121 MIFQDPLSSLNPRKRVRDIIGEAPLVHGIVERKQ-LDAYVVDVMERVGLNPDFRERFPHQ 179
           MIFQDP +SLNPR  V DIIGE    HGI+  K  L   V ++++ VGL+P    ++PHQ
Sbjct: 117 MIFQDPYASLNPRWIVEDIIGEPLREHGIISDKAALRERVGELLKSVGLSPLDMSKYPHQ 176

Query: 180 FSGGQRQRIGIGRALAVKPDFLICDESIAALDVSIQAQIINLFMQLRRDLGLTYLFISHD 239
           FSGGQRQRI I RALA +P+FL+CDE  +ALDVS+QAQ++N+   L+R+ GLTYLFISH+
Sbjct: 177 FSGGQRQRISIARALATQPEFLVCDEPTSALDVSVQAQVLNIMKDLQREQGLTYLFISHN 236

Query: 240 LGVVEHISDRVAIMYLGRIVETAPTVELFANPQHPYTIALLAQVPRLSNRKRQFESIQGE 299
           L VV H++D+V +MYLGR+VE A   +LFA PQHPYT  LL  +P++ +  R    +QGE
Sbjct: 237 LAVVRHVADQVGVMYLGRLVEVADKQKLFAAPQHPYTRMLLDAIPQMKHTGRSRTPVQGE 296

Query: 300 IPSPLAPPDGCHFHPRCPHATQRCRTERPLLRQSGAAHQVACHLVE 345
           +P+PL PP GC FHPRCPHA  RC  ERP L    A  QVACH VE
Sbjct: 297 VPNPLNPPTGCAFHPRCPHANARCSAERPKL-LGIAGVQVACHAVE 341