Pairwise Alignments

Query, 663 a.a., Fis family transcriptional regulator from Burkholderia phytofirmans PsJN

Subject, 528 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

 Score =  283 bits (725), Expect = 1e-80
 Identities = 174/410 (42%), Positives = 232/410 (56%), Gaps = 53/410 (12%)

Query: 272 GVSYVVHRGPLASSSAAAGTVLTFQESRAVER------LDRTLRSRQRVQQ------FSA 319
           G   VV  G +   +  AG    F  S A  R      LD T  S +             
Sbjct: 152 GTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHNTHDATRNALRT 211

Query: 320 RYRLDDIVGASDSIERVRALVRRYARSDATVLILGESGTGKEMVAQSMHQ--------LS 371
           RY L D++G S  +E+VR  +  YARS A VLI GE+GTGKE+ AQ++H+          
Sbjct: 212 RYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQ 271

Query: 372 PRRDFAFVAINCGAFPEALLESELFGYEEGAFTGARKGGKAGLIEVAHRGTLFLDEIGEM 431
            ++   FVA+NCGA  E+LLE+ELFGYEEGAFTG+R+GG+AGL E+AH GTLFLDEIGEM
Sbjct: 272 GKKSHPFVAVNCGAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEM 331

Query: 432 PLSLQSRLLRVLQEREVVRLGSTEPTRVDIRVVAATHRALTEGIEAGSFRADLYYRLNIL 491
           PL LQ+RLLRVL+E+EV R+G  +P  VD+RV++ATH  L E ++ G FR DL+YRL+IL
Sbjct: 332 PLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSIL 391

Query: 492 SIALPPLRERPTDLLPLAVELLLQAAAREPRLAARLPDAAAAERLLATLAEPLKRYAWPG 551
            + LPPLRER  D+LPLA   L  + A     A   P +AA  + L      L  Y WPG
Sbjct: 392 RLQLPPLRERVADILPLAESFLKVSLA-----ALSAPFSAALRQGLQASETVLLHYDWPG 446

Query: 552 NVRELQNVIERIAVELADVDVDADANADVGAISAGAAAPVLTRDMLRTVAPEIVEPHART 611
           N+REL+N++ER+A+ L+      +   D+         P L R+  +T AP ++ P    
Sbjct: 447 NIRELRNMMERLALFLS-----VEPTPDLTPQFMQLLLPELARESAKTPAPRLLTP---- 497

Query: 612 KKAALTLRERSRHVEADEIRAALAAHDGDRDAVCEALGISKTTLWRKLSA 661
                              + AL   +GD+ A    LGIS+TT WR+L +
Sbjct: 498 -------------------QQALEKFNGDKTAAANYLGISRTTFWRRLKS 528



 Score =  147 bits (371), Expect = 1e-39
 Identities = 91/231 (39%), Positives = 133/231 (57%), Gaps = 5/231 (2%)

Query: 1   MSTPPFEPVQRPRIWAVSISRLRDLFFDIAGEYVERADLRIVSHGFEDAVREIDAAGAG- 59
           M+ PP     +P IW VS++RL +LF DI+ E+   A++  +  GFE AV  I    A  
Sbjct: 1   MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANE 60

Query: 60  RPDVVIAGGSNGAYLKTRVSVPVVLIGPTGFDVMHALARARRDGAKVALVTHGNTPDEVR 119
           R D +IA GSNGAYLK+R+SVPV+LI P+G+DV+ ALA+A +  + + +VT+  T   + 
Sbjct: 61  RCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALV 120

Query: 120 RFVAAYALDVTFASYQSAQHAESVVLDLRDRGIDVVVGPGMVTDLAANAGMGAVFLYSRA 179
            F   + L +   SY + + A   + +L+  G + VVG G++TDLA  AGM  +F+YS A
Sbjct: 121 AFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAA 180

Query: 180 SVRAAFDTALEVAQATRRETIRRQRLDNLLQHLRDGVVALDAQGRVEAMNQ 230
           +VR AF  AL++     R ++R    D     LR   V  D  G+   M Q
Sbjct: 181 TVRQAFSDALDMT----RMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQ 227