Pairwise Alignments

Query, 289 a.a., flagellar motor protein MotA from Burkholderia phytofirmans PsJN

Subject, 246 a.a., flagellar motor protein from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 4e-18
 Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 34/256 (13%)

Query: 5   IGWLLVIGSVIGSFVGVGGHLPALLQPFELLCIFGAAIGAFVVSNPTSTLKKTIKAI--- 61
           IG ++   ++IG     GGHL AL      L + G  +GA ++ +P S+ K+ ++ +   
Sbjct: 7   IGIIMAFVAIIGGNYLEGGHLGALANGPAALIVIGGTVGAALLQSPLSSFKRAMQILVWI 66

Query: 62  ---PSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVGAPEESVIFQKYSHVLE 118
              P     GG  +     L A         RKEG++ LE    A  +S   +       
Sbjct: 67  IFPPRVDLPGGIDRVVNWSLTA---------RKEGLLGLEGVADAEPDSYARKG------ 111

Query: 119 DHHLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIV 178
               L  +VD              ++ +++ +  T  +    AA   + M    P  GI+
Sbjct: 112 ----LQLLVD--------GAEPEAIRSILEVDFYTQESRDINAAKVFESMGGYAPTIGII 159

Query: 179 AAVMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPVADLLNAKGRAEAKPY 238
            AVMG++H MG++ A P+ LG  IA A V T  G+  A   + PVA  L +    +++  
Sbjct: 160 GAVMGLIHVMGNL-ADPSQLGSGIAVAFVATIYGVASANLVLLPVASKLKSIAMRQSRYR 218

Query: 239 QCVKAVLLASLSGYAP 254
           + +   +L+   G  P
Sbjct: 219 EMLLEGILSIAEGENP 234