Pairwise Alignments

Query, 498 a.a., RND transporter from Burkholderia phytofirmans PsJN

Subject, 472 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  296 bits (759), Expect = 8e-85
 Identities = 179/468 (38%), Positives = 263/468 (56%), Gaps = 9/468 (1%)

Query: 10  LTTLASAALLA--ACTVGPNYERPQAEVPPTWQ---TDSYWRVAVPSHAPISPDWWNAFS 64
           L  LA+  LLA   C++ P Y+ P  ++P  ++   +D  W  A PS   ++P+WW  ++
Sbjct: 5   LKPLAALMLLALQGCSMAPTYQVPAVDLPAGYREQTSDGPWHSAQPSDQ-LAPEWWTLYN 63

Query: 65  DPTLATLETQALAQNQTLVAASAHYEQARATLANDRAQQIPEVDLAAQGSRFRISQNRPR 124
           D  L  L+ Q L  N  L AA AH++ ++A  +   A   P++  +AQ  R R S +RP 
Sbjct: 64  DSRLNDLQQQLLKANPDLAAALAHFDASQAYASQLHAGLFPQISASAQPLRQRQSDSRPL 123

Query: 125 TNYGTPTTSTVQNNVQLGPTISYDTDLFGRIRREVEGAAASAQQSADDLANARLVLTTDL 184
                 T  +V N+   G ++SYD DL+G+IR +V    A AQ S DDLA ARL L   L
Sbjct: 124 RG---DTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQHQL 180

Query: 185 ASDYFSLRELDAEIDVLNQSVKLQQKALDYVTTEHDLGSVSGLDVLQQKSLLDSTRVQAQ 244
           A+ Y  L  LDA+  +L++S+   ++AL    + ++    S LD+ + ++ L   + Q  
Sbjct: 181 ATLYVQLNGLDAQARILDRSLDDFRQALQLTRSRYEGKIASELDLTRAQNQLAEAKAQWD 240

Query: 245 LLLNQRAQFEHAIAALVGVPAPQFSIEPKVLAVQVPAIALGVPSDVLQRRPDVASAERAM 304
            +  QR   EHAI  LVGV A  FS+ P    + +P I   +PS +LQRRPD+A+AER +
Sbjct: 241 EIRGQRNLTEHAIGELVGVAASDFSLSPSPQLISLPGIPSQLPSHLLQRRPDIAAAERRV 300

Query: 305 AAANAQIGVAKAAFFPSLTLAPSIGWESTQFASLLSAPTLMWTLGAAVGQVLFDGGRRAA 364
            AANA IGVAKAA++P  +L   IG ++    +LLSA    W LG  V   +FDGGR +A
Sbjct: 301 FAANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLVNLPIFDGGRLSA 360

Query: 365 NVKFASEGYKATEANYRQTVLTAFQQVQDGITGLSVLDGAAKQSSEAVTDARHLLALAND 424
           N + A   ++   A+YR  VL A ++V+D +  L  L   A+    A   A+H  +LA +
Sbjct: 361 NERQAKAEFEEASAHYRSQVLKAVREVEDNLAQLRDLQQEAQDEQAAADAAQHTQSLAMN 420

Query: 425 RYSGGLVAYLDVITAQQSLLTSERQDVQIHGQQMTLSVSLVKALGGGW 472
            Y  G V+YLDV+TAQ + L ++R    +  +Q+  SV LV ALGGGW
Sbjct: 421 SYQAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALGGGW 468