Pairwise Alignments

Query, 509 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN

Subject, 506 a.a., ABC-type sugar transport system, ATPase component from Enterobacter asburiae PDN3

 Score =  406 bits (1044), Expect = e-118
 Identities = 217/495 (43%), Positives = 317/495 (64%), Gaps = 2/495 (0%)

Query: 6   SAVPRLELRHASKSFGRVRALSDGDLALWPGEVHALLGENGAGKSTVVKILAGVHQPDTG 65
           S  P LE+R  +K+FG   AL   DL ++PGE+HAL+GENGAGKST++KILAG +   +G
Sbjct: 2   SRTPVLEMRSIAKTFGSFHALKGVDLTVFPGEIHALMGENGAGKSTLMKILAGAYTATSG 61

Query: 66  ELVVDGEARRFATPAEARDAGLAVIYQEPTLFFDLSIAENIFMGRQPVDRIGRIQYDAMR 125
           E+++D +      P +A  AG+ +IYQE  L  +L++AENIF+G + + R G +Q   M 
Sbjct: 62  EILIDDQPFHIKGPKDALAAGITLIYQEMQLAPNLTVAENIFLGSE-LSRGGMVQRKEMV 120

Query: 126 REVDGLLASLGVDLRADQLVRGLSIADQQVIEIAKALSLNANVLIMDEPTAALSLPEVER 185
            +   ++  LG    A  LV  L+IA+QQ +EIA+AL  N+ +L+MDEPTAALS  E  R
Sbjct: 121 AQAQAVIERLGAQFNATDLVMKLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHR 180

Query: 186 LFTIVRKLRERDVAILFITHRLDEVFALTQRVTIMRDGAKVFDGLTTDLNTEAIVAKMVG 245
           LF ++ +LR+  +AI++I+HR+ EV+ L+ RV+++RDG  V       LN   +V  MVG
Sbjct: 181 LFELILRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDKLNASELVRMMVG 240

Query: 246 RDLETFYPKA-ERPPGEVRLSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAGRSEVARA 304
           R L   + K  + P G  RL+V  LT     +  S  VR+GEIV LAGLVGAGRSE+A+ 
Sbjct: 241 RPLSDLFNKERDIPLGSPRLNVHHLTDGKKVQPCSLQVRSGEIVGLAGLVGAGRSELAQL 300

Query: 305 IFGIDPLDSGEIWIAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLG 364
           IFG+     G I + G+ +    P AA+  G+  + E+R++QGL LEL+   N +M  L 
Sbjct: 301 IFGVRKATGGMIEVDGEPVVIHSPRAAIENGIGFLTENRKEQGLFLELAAQENITMATLE 360

Query: 365 RLVKHGLISARSETQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLATGPKVLI 424
           R    G+++ +    +++     L ++        G LSGGNQQK+++ +W+A GP++LI
Sbjct: 361 RDATFGMLNRKKAQSISDDAIALLNIRVPHSQVRAGGLSGGNQQKLLISRWVAIGPRILI 420

Query: 425 IDEPTRGIDVGAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISADIA 484
           +DEPTRG+DVGAK+E+Y  + ++ R G+A+LMISSELPEV+GM+DRV VM EG I+ ++ 
Sbjct: 421 LDEPTRGVDVGAKSEIYRIMNQMARKGVAILMISSELPEVVGMSDRVYVMREGSIAGELH 480

Query: 485 RADADEERIMGAALG 499
             D  +E IM  A G
Sbjct: 481 GRDISQENIMTLATG 495



 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 6/248 (2%)

Query: 258 PPGEVRLSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAGRSEVARAIFGIDPLDSGEIW 317
           P  E+R   +        K +   V  GEI AL G  GAG+S + + + G     SGEI 
Sbjct: 5   PVLEMRSIAKTFGSFHALKGVDLTVFPGEIHALMGENGAGKSTLMKILAGAYTATSGEIL 64

Query: 318 IAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLGRLVKHGLISARSE 377
           I  +      P  A+ AG+ L+ ++ +   LA  L++A N  +     L + G++  +  
Sbjct: 65  IDDQPFHIKGPKDALAAGITLIYQEMQ---LAPNLTVAENIFLG--SELSRGGMVQRKEM 119

Query: 378 TQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLATGPKVLIIDEPTRGIDVGAK 437
              A     RL  +    +  V  L+   QQ+V + + L    ++L++DEPT  +     
Sbjct: 120 VAQAQAVIERLGAQFNATDL-VMKLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRET 178

Query: 438 AEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISADIARADADEERIMGAA 497
             ++  +  L  +GMA++ IS  + EV  ++DRV V+ +G+    + R   +   ++   
Sbjct: 179 HRLFELILRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDKLNASELVRMM 238

Query: 498 LGQPMPPL 505
           +G+P+  L
Sbjct: 239 VGRPLSDL 246