Pairwise Alignments

Query, 509 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN

Subject, 506 a.a., Ribose import ATP-binding protein RbsA from Escherichia coli ECRC98

 Score =  405 bits (1042), Expect = e-117
 Identities = 213/495 (43%), Positives = 323/495 (65%), Gaps = 2/495 (0%)

Query: 6   SAVPRLELRHASKSFGRVRALSDGDLALWPGEVHALLGENGAGKSTVVKILAGVHQPDTG 65
           ++ P LE+R+ +K+FG+  AL   DL ++PGE+HAL+GENGAGKST++K+LAG +   +G
Sbjct: 2   NSTPVLEMRNIAKAFGKFYALKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATSG 61

Query: 66  ELVVDGEARRFATPAEARDAGLAVIYQEPTLFFDLSIAENIFMGRQPVDRIGRIQYDAMR 125
           E+++DG+     TP +A  AG+ +IYQE  L  +LS+AENIF+G + +   G +Q   M 
Sbjct: 62  EILIDGKPFHIRTPKDALSAGITLIYQEMQLAPNLSVAENIFLGSE-LSHGGLVQRKEML 120

Query: 126 REVDGLLASLGVDLRADQLVRGLSIADQQVIEIAKALSLNANVLIMDEPTAALSLPEVER 185
            +   ++  LG    A   V  L+IA+QQ +EIA+AL  N+ +L+MDEPTAALS  E  R
Sbjct: 121 VQAQKVIDRLGAQFNASDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHR 180

Query: 186 LFTIVRKLRERDVAILFITHRLDEVFALTQRVTIMRDGAKVFDGLTTDLNTEAIVAKMVG 245
           LF ++ +LR+  +AI++I+HR+ EV+ L+ RV+++RDG  V      +LN   +V  MVG
Sbjct: 181 LFELIMRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDNLNAGELVRMMVG 240

Query: 246 RDLETFYPKA-ERPPGEVRLSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAGRSEVARA 304
           R L   + K  + P G+ RL+V  LT  G  +  S  VR+GEIV LAGLVGAGRSE+A+ 
Sbjct: 241 RPLSDLFNKERDIPLGKARLNVHHLTDGGKVQPSSLLVRSGEIVGLAGLVGAGRSELAQL 300

Query: 305 IFGIDPLDSGEIWIAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLG 364
           IFG+     G I + G+ +    P  A+  G+  + E+R++QGL LE++ A N +M  L 
Sbjct: 301 IFGVRKATGGMIEVDGEPVVIHSPREAIDLGIGFLTENRKEQGLFLEMAAAENITMATLE 360

Query: 365 RLVKHGLISARSETQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLATGPKVLI 424
           R  + G+++ +    +++     L ++        G LSGGNQQK+++ +W+A GP++L+
Sbjct: 361 RDARWGMLNRKKAQTISDDAIKLLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGPRILL 420

Query: 425 IDEPTRGIDVGAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISADIA 484
           +DEP RG+DVGAK+E+Y  + E+ R G+A+LMISSELPE++GM+DRV VM EG I+ ++ 
Sbjct: 421 LDEPARGVDVGAKSEIYRIMNEMARKGVAILMISSELPEIVGMSDRVYVMREGSIAGELN 480

Query: 485 RADADEERIMGAALG 499
             +  +E IM  A G
Sbjct: 481 GKNITQENIMTLATG 495



 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 6/248 (2%)

Query: 258 PPGEVRLSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAGRSEVARAIFGIDPLDSGEIW 317
           P  E+R   +   +    K +   V  GEI AL G  GAG+S + + + G     SGEI 
Sbjct: 5   PVLEMRNIAKAFGKFYALKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATSGEIL 64

Query: 318 IAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLGRLVKHGLISARSE 377
           I GK      P  A+ AG+ L+ ++ +   LA  LS+A N     LG  + HG +  R E
Sbjct: 65  IDGKPFHIRTPKDALSAGITLIYQEMQ---LAPNLSVAENI---FLGSELSHGGLVQRKE 118

Query: 378 TQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLATGPKVLIIDEPTRGIDVGAK 437
             +  Q          + +  V TL+   QQ+V + + L    ++L++DEPT  +     
Sbjct: 119 MLVQAQKVIDRLGAQFNASDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRET 178

Query: 438 AEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISADIARADADEERIMGAA 497
             ++  +  L  +GMA++ IS  + EV  ++DRV V+ +G+    + R + +   ++   
Sbjct: 179 HRLFELIMRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDNLNAGELVRMM 238

Query: 498 LGQPMPPL 505
           +G+P+  L
Sbjct: 239 VGRPLSDL 246