Pairwise Alignments

Query, 509 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN

Subject, 499 a.a., hypothetical protein from Escherichia coli BL21

 Score =  401 bits (1031), Expect = e-116
 Identities = 216/490 (44%), Positives = 320/490 (65%), Gaps = 9/490 (1%)

Query: 11  LELRHASKSFGRVRALSDGDLALWPGEVHALLGENGAGKSTVVKILAGVHQPDTGELVVD 70
           L+++H +K F  V AL+D   +L  GEVHALLGENGAGKST++KIL+GV+QPD GE++ +
Sbjct: 6   LQMKHITKRFPGVLALNDVQFSLRRGEVHALLGENGAGKSTLMKILSGVYQPDEGEIIFE 65

Query: 71  GEARRFATPAEARDAGLAVIYQEPTLFFDLSIAENIFMGRQPVDRIG-RIQYDAMRREVD 129
            +   F+ P  A++ G+ +I+QE  LF +L++ ENIF+GR+   +   R+     R+   
Sbjct: 66  DKPVSFSDPLSAQNVGITIIHQEFNLFPELTVEENIFIGREFCKKNRWRLDEKQQRQATI 125

Query: 130 GLLASLGVDLRADQLVRGLSIADQQVIEIAKALSLNANVLIMDEPTAALSLPEVERLFTI 189
            +L  L + ++ D LV  L++A QQ++EIAKA+S+NA +LIMDEPTAAL+  E+E LF +
Sbjct: 126 EILQKLNLAIKPDTLVADLTVAQQQMVEIAKAISVNARILIMDEPTAALTETEIESLFRV 185

Query: 190 VRKLRERDVAILFITHRLDEVFALTQRVTIMRDGAKVFDGLTTDLNTEAIVAKMVGRDLE 249
            R L+E+   I++I+HRL+E+  +  R T+MRDG  +       +    ++A MVGRDL 
Sbjct: 186 TRLLKEQGTGIVYISHRLEELALIADRATVMRDGQYISTVDYECVKISDLIAMMVGRDLG 245

Query: 250 TFYPKAERPPGEVR-LSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAGRSEVARAIFGI 308
             YP+ E     +  L V GLTR GV  DI+F +  GEI+  AGL+GAGR+E+ARAIFG 
Sbjct: 246 NIYPRREALQQRIPVLEVNGLTRKGVLNDINFTLYRGEILGFAGLMGAGRTELARAIFGA 305

Query: 309 DPLDSGEIWIAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLGRLVK 368
           D +DSG + + GK       + A++ G++ + EDR+++GLAL LS+ RN    +LG   +
Sbjct: 306 DSIDSGTLKLNGKETVIKDISDAIQQGISYLTEDRKKEGLALNLSVERNI---MLGNYPE 362

Query: 369 H----GLISARSETQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLATGPKVLI 424
           +    G + +R   Q + +    LR+K  +       LSGGNQQK+++ +W+     +LI
Sbjct: 363 YSDRFGNVDSRRCQQTSEEQVKALRIKTPNLEQAALNLSGGNQQKIIIARWVCKDTDILI 422

Query: 425 IDEPTRGIDVGAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISADIA 484
            DEPTRGIDVGAK E+Y  +  LV  G +++MISSELPEVLGM DR+LVM  GRI+ +++
Sbjct: 423 FDEPTRGIDVGAKLEIYELMNRLVAKGKSIIMISSELPEVLGMCDRILVMRSGRITGELS 482

Query: 485 RADADEERIM 494
             +A +E+IM
Sbjct: 483 AKEATQEKIM 492