Pairwise Alignments

Query, 214 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 213 a.a., PAS domain-containing protein from Serratia liquefaciens MT49

 Score = 71.2 bits (173), Expect = 1e-17
 Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 7/203 (3%)

Query: 12  LLLERYAPIADGIAALFYPCAEVVIHDLR--DQTIAYLVNNLSKLEVGGPSV---LDEVH 66
           LLL     I   + A+F P  EVV+HDL   +  I  + NNLS   +G  +    L+ + 
Sbjct: 10  LLLREAEKIVQALGAMFAPSCEVVLHDLTQPNHAIVSIANNLSNRNIGDAASEMGLERIA 69

Query: 67  YAARGRTIGPYEKLNWDGRRMRCVSNILFDDDGKPAGMLCINFNIAVFEDVRSTLDLFIK 126
                  +  Y     DGR  +  S  L +  G     +CIN ++++F  V + L     
Sbjct: 70  SPEFPDVVQNYANAFPDGRPAKSTSIGLRNSQGVYVAAICINLDVSIFNSVNAILQQLTA 129

Query: 127 GGNLTDAPAEELFRDDWQDRINTYLHTWLRERQIGINALTREHKREIVEALHAQGAFRGR 186
               T   A+E  R      I + ++ +         ALT E + ++++ L  QG  + R
Sbjct: 130 VVQSTPQAADEGARS--LSDIASVINNFAASHATAPRALTSEQRVQVIQQLKQQGYLQLR 187

Query: 187 SSANYVAAVLTMGRATVYKILKQ 209
            +A   A  L + R +VY +LK+
Sbjct: 188 GAATMAAEALGISRVSVYNLLKR 210