Pairwise Alignments

Query, 246 a.a., type III secretion protein from Burkholderia phytofirmans PsJN

Subject, 378 a.a., flagellar biosynthesis protein FlhB from Pseudomonas simiae WCS417

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 10/250 (4%)

Query: 3   DKTEAPTPNRLRRARKDGDIAKSTHVSVAVSGLFWLLFLLMD----APHVYQVCVHVVEV 58
           DKTE PT  R + +R+ G+IA+S  ++   + +     LL+     A  + ++  H   +
Sbjct: 9   DKTEDPTEKRKKDSREKGEIARSKELNTVATMMAGAGALLIYGGGLALDLMELMKHNFTL 68

Query: 59  ATQIDQGQPFAVRYLQITR--AFGAAMPILLATLGVGALAVVVPEVAQAGGVFAVKRALP 116
              +        +YL  +   A  A  PIL+  L    LA ++  VA  G +FA     P
Sbjct: 69  PRDVLLNPDAMGQYLLHSGKIAILAVQPILITLL----LAALIGPVALGGWLFAAGSMAP 124

Query: 117 DFKRLNPVTGLKNLFGLKTLIDTGIVLMQFCILVFVLWHAFATWCAQLLPAFALAFGGQL 176
            F R+NP  GLK +F  K L++    L +F +++FV     ++    LL          +
Sbjct: 125 KFSRMNPAAGLKRMFSTKALVELLKALAKFILILFVALMVLSSDIDDLLRIAHEPLESAI 184

Query: 177 SVTAQSLAQLQGLMAASQLAPAAIDFWLQRLQWRRRLRMDKNEIKREHRDEDGDPHVKGR 236
             + Q +      MAA  +  AA+D  +Q  +  ++L M K E++ EH+D++G P VK R
Sbjct: 185 IHSVQVVGWSALWMAAGLIIIAAVDAPIQLWESHKKLLMTKQEVRDEHKDQEGRPEVKQR 244

Query: 237 RRALHRELSR 246
            R L RE+S+
Sbjct: 245 IRQLQREMSQ 254