Pairwise Alignments

Query, 246 a.a., type III secretion protein from Burkholderia phytofirmans PsJN

Subject, 385 a.a., Flagellar biosynthesis protein FlhB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 4/247 (1%)

Query: 3   DKTEAPTPNRLRRARKDGDIAKSTHVS-VAVSGLFWLLFLLMDAPHVYQVCVHVVEVATQ 61
           DK    T  RL++AR DG + +S  +S +AV G   L+ + + AP  ++     ++   +
Sbjct: 7   DKNLPATAQRLKKARDDGQVPRSKDLSNLAVLGGGALVLVAL-APTGFEKLRSALQGQLR 65

Query: 62  IDQGQPFAVRYLQITRAFGAAMPILL-ATLGVGALAVVVPEVAQAGG-VFAVKRALPDFK 119
            D                G A  ++L   LGV  LA+V+     +G    + K  +PD  
Sbjct: 66  FDHQALLKPELATERLVDGFAQGLMLYLPLGVAVLAIVLLAAFGSGSWAISTKPLMPDLS 125

Query: 120 RLNPVTGLKNLFGLKTLIDTGIVLMQFCILVFVLWHAFATWCAQLLPAFALAFGGQLSVT 179
           R+NP+ G+  LF  + L DT  +     I+  V W   ++                L   
Sbjct: 126 RINPLKGIGRLFTKQQLFDTAKLAAIAAIIGLVAWQFISSHVQDFAMLVMQPLESGLGQL 185

Query: 180 AQSLAQLQGLMAASQLAPAAIDFWLQRLQWRRRLRMDKNEIKREHRDEDGDPHVKGRRRA 239
              L    GL+       A IDF  Q+    +R+RM   E+K+EH++ +GDPH K +RRA
Sbjct: 186 GHWLMVGVGLLLLVVTLVAIIDFPAQKFLHAQRMRMSHQEVKQEHKEAEGDPHFKSKRRA 245

Query: 240 LHRELSR 246
           + RE+++
Sbjct: 246 MQREMAQ 252