Pairwise Alignments

Query, 857 a.a., multidrug ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

Subject, 839 a.a., ABC transporter permease from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 73.2 bits (178), Expect = 6e-17
 Identities = 101/418 (24%), Positives = 166/418 (39%), Gaps = 46/418 (11%)

Query: 28  RSHRGRALVAIATIALGVALGYAVQLINSAAFNEFSAAARSLSGEADLQVRGAQPLVDEA 87
           R +RGR  + I++I LG+A   A+   +     +    A+SL G ADL +   + +  E 
Sbjct: 7   RRNRGRLALFISSIVLGIAALVAINSFSDNLRTDIDKQAKSLIG-ADLVIASNKEIEPEM 65

Query: 88  IYPLLANAPGVALASPVLALDVTVPDRSAALPVLGIDVFKAGRIAPDLIGVP-------- 139
              L +   G   +  V  + + V + S    ++ +   + G       G P        
Sbjct: 66  QQLLDSIGVGGDRSDEVRFVSMVVFEASGGTRLVQVRALERG-------GFPYYGAIETE 118

Query: 140 --SPDKPFDSLATDTVFLSTAAQQWLKVKAGDEVALRSGTSIVHLRVAGGIVRTRPGQRL 197
             S  K F       +   T   Q+   K GD + + + T      +AG + +  PGQ  
Sbjct: 119 PASASKSFREDGRQALVDQTLLLQY-NTKPGDSIKIGNQT----FEIAGALHKI-PGQSA 172

Query: 198 AVMDIAAAQW-------KFGKLGKLSRVDV----QLERGVDRERFRRELQARLGNQWVIA 246
               IA A +       + G L + SR+      +L    D ++  ++L+ RL       
Sbjct: 173 MTATIAPAVYIPRRYLDETGLLQRGSRISYYHYYKLPESTDADKLVKKLEPRLEEAGFGY 232

Query: 247 ETRDAESRTDRLSRAYRINMNVLALV---ALFTGAFLVFSTQALSVVRRRAQFAMLRVLG 303
           +T   ESR +   +AY      LALV   AL  G   V S   + +  + A   +LR LG
Sbjct: 233 DT--IESRKESTGKAYEDLARFLALVGFVALLLGCVGVASAVHVYIREKLATIGVLRCLG 290

Query: 304 LTRGQLLRQILVEGALLGLLGSLAGLALGYAMASSALHFFGSDLGGGYFPGVQPRVGFEP 363
           ++  Q     L +   +GL+GS+ G  LG     S +  +   L   + P V+  V    
Sbjct: 291 VSGRQAFLIYLFQVIAMGLIGSVVGAVLG-----SLIQLYLPQLFQSFLP-VEVTVAVSW 344

Query: 364 LASALFLMLGLAVSVLGSLAPALEAARARPATALKAGAEEGALARLATPWPALLCLLA 421
            A    + +G+ +SVL +L P L      P   L+AG E  +       W     ++A
Sbjct: 345 SAIGQGIAIGVIISVLFALLPLLSVRNVSPLITLRAGIEHVSSGPDKVRWGVYFLIVA 402



 Score = 37.0 bits (84), Expect = 5e-06
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 3/126 (2%)

Query: 269 LALVALFTGAFLVFSTQALSVVRRRAQFAMLRVLGLTRGQLLRQILVEGALLGLLGSLAG 328
           +AL ++ TG  ++  +   S  +R  +  +LR LG +R Q+L     E  LLG L +  G
Sbjct: 717 MALFSISTGLLVLIGSINNSKYQRVQESVLLRTLGASRKQILSINAFEYLLLGALAAGTG 776

Query: 329 LALGYAMASSALHFFGSDLGGGYFPGVQPRVGFEPLASALFLMLGLAVSVLGSLAPALEA 388
           + L    AS AL  F  ++   + P + P +      + L +++G+  S      P LE 
Sbjct: 777 VILAVG-ASWALAVFSFEV--AFVPDLTPLLPVFLAITGLTMLIGMLNSRGILNRPPLEV 833

Query: 389 ARARPA 394
            R   A
Sbjct: 834 LRREAA 839



 Score = 36.2 bits (82), Expect = 8e-06
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 729 LLEAVAIVIGLFGVAATFSAQTLARSREFGMLRHVGVTRSQVLAILALEGGMLTACGIAL 788
           L+  VA+++G  GVA+        +    G+LR +GV+  Q   I   +   +   G  +
Sbjct: 255 LVGFVALLLGCVGVASAVHVYIREKLATIGVLRCLGVSGRQAFLIYLFQVIAMGLIGSVV 314

Query: 789 GFVLGSAISLILVFVVNPQSFHWSMSLHV 817
           G VLGS I L L     PQ F   + + V
Sbjct: 315 GAVLGSLIQLYL-----PQLFQSFLPVEV 338



 Score = 34.3 bits (77), Expect = 3e-05
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 8/155 (5%)

Query: 695 LRALPFGASLDLSLPGEIRARTL--VIFDRSFAVTYLLEAVAIVIGLFGVAATFSAQTLA 752
           +R  P  +++DL L  E    TL  ++   SF + ++    +I  GL  +  + +     
Sbjct: 685 VRQFPNVSAIDLGLILE----TLDDILGKISFVIRFMA-LFSISTGLLVLIGSINNSKYQ 739

Query: 753 RSREFGMLRHVGVTRSQVLAILALEGGMLTACGIALGFVLGSAISLILVFVVNPQSFHWS 812
           R +E  +LR +G +R Q+L+I A E  +L A     G +L    S  L       +F   
Sbjct: 740 RVQESVLLRTLGASRKQILSINAFEYLLLGALAAGTGVILAVGASWALAVFSFEVAFVPD 799

Query: 813 MSLHVPWIALATVAVVMLASSCSTAVIAGRDAVSV 847
           ++  +P + LA   + ML    ++  I  R  + V
Sbjct: 800 LTPLLP-VFLAITGLTMLIGMLNSRGILNRPPLEV 833