Pairwise Alignments

Query, 172 a.a., RNA polymerase subunit sigma-24 from Burkholderia phytofirmans PsJN

Subject, 168 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score =  103 bits (256), Expect = 2e-27
 Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 5/171 (2%)

Query: 2   DVRDELMEHVPRLRRYARALINNRDLADDLVQDTLERALGRTGMFQPGTDLRAWLFTIMH 61
           ++ ++L E +PRLRR+A +L  N   ADDLVQ TLERA+      +   DLRAWLF+I++
Sbjct: 3   ELDEQLRELIPRLRRFAVSLTRNASSADDLVQSTLERAIISWADKRVEGDLRAWLFSILY 62

Query: 62  NVFANQARKASARAVHVAVDDESVSESEFAVPSEQTRSLEMRDLDYALQRLPMEQREVVL 121
             F +  R+    A  +    E  +  + A PS +   +    L  A  +L  EQR ++L
Sbjct: 63  RQFLDAHRRTRRYARML----EFFTGRDDAQPSVERTVIAQSTLQ-AFDQLNTEQRALLL 117

Query: 122 LVGLEEMSYADVALALNIPLGTVMSRLSRGRERLRALMAGTQPGAKLQVVR 172
            V +E +SY ++A  L +P+GTVMSRLSR R+ LR L  G      L++++
Sbjct: 118 WVSVEGLSYKEIAEILEVPIGTVMSRLSRARQALRLLSDGEIASPSLRILK 168