Pairwise Alignments

Query, 172 a.a., RNA polymerase subunit sigma-24 from Burkholderia phytofirmans PsJN

Subject, 197 a.a., RNA polymerase subunit sigma from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 85.1 bits (209), Expect = 7e-22
 Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 12/163 (7%)

Query: 6   ELMEHVPRLRRYARALINNRDLADDLVQDTLERALGRTGMFQPGTDLRAWLFTIMHNVFA 65
           EL+  +  L  +A  L  + D A+DLVQ+T  +A      F+ GT+ +AWLF I+ N F 
Sbjct: 21  ELLPVLDPLYNFAYRLTLDEDDANDLVQETYLKAYRFFDYFEQGTNAKAWLFRILKNSFI 80

Query: 66  NQARKASARAVHVA------------VDDESVSESEFAVPSEQTRSLEMRDLDYALQRLP 113
           N+ RK S +   V             V+ ES   S   + +E  + L   ++  AL  LP
Sbjct: 81  NEFRKKSKQPAKVDYSEVEGYYNSEDVEGESGVASTTDMRTESVQDLIGDEVASALNALP 140

Query: 114 MEQREVVLLVGLEEMSYADVALALNIPLGTVMSRLSRGRERLR 156
           ++ R V++L  LE  +Y ++A  L+IP+GTV SRL R R  L+
Sbjct: 141 VDFRTVIILCDLEGFTYEEMAKILDIPIGTVRSRLHRARNSLK 183