Pairwise Alignments
Query, 549 a.a., sugar ABC transporter ATP-binding protein from Burkholderia phytofirmans PsJN
Subject, 503 a.a., sugar ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235
Score = 376 bits (966), Expect = e-108
Identities = 210/508 (41%), Positives = 317/508 (62%), Gaps = 18/508 (3%)
Query: 39 LEPILATAGVSKTFPGVKALQRVDFRLFPGEIHTLMGQNGAGKSTLINVLTGVLAPDEGT 98
+ P+++ +SK+FPGV+AL V F L GE+H LMG+NGAGKSTL+ +L GV D G
Sbjct: 1 MTPLISVNRLSKSFPGVRALHEVQFELMAGEVHALMGENGAGKSTLMKILAGVYTRDSGE 60
Query: 99 IRLGGELVAFASPQEAEGAGVRTLYQEVNLCPNLSVAENIFAGRQPR-RFGA-IDWPDIK 156
I G+ V F SP EA+ G+ ++QE+ L +L+VA+N+F GR+PR R G +D +
Sbjct: 61 ILYDGKPVDFTSPGEAQALGIGIIHQELQLMNHLTVAQNMFIGREPRGRLGLFLDEDRLN 120
Query: 157 RRAQAALARLDVTLDVTRSLDAYPIAVQQMVAIARALSVDARVLILDEPTSSLDDGEVSQ 216
+A+ L R+ V LD +D+ +A QQMV IA+ALS D+RVLI+DEPTS+L+D E+++
Sbjct: 121 AQAREILTRMHVNLDPRTVVDSLTVASQQMVEIAKALSFDSRVLIMDEPTSALNDAEIAE 180
Query: 217 LFKILRHLKQSGIAILFVTHFIEQTYAISDRITVMRNGEREGEYLARDLPADQLVSKMVG 276
LF+I+R LK+ G+ I++++H +++ ISDR+TV+ R+GEY+A A+ V ++G
Sbjct: 181 LFRIIRQLKERGVGIIYISHKMDELKQISDRVTVL----RDGEYVATVATAESSVPAIIG 236
Query: 277 HERMSARLREAAHEGHQGHEAHAGPQAAQAVQPFVELRGVGRRGTMQPIDLDVQPGQILG 336
M + A E HQ H A +E++ + ++ + ++ G+ILG
Sbjct: 237 ---MMVGRKLADVEPHQ--NTHTAGDVA------LEVKNLNAGPLVRNVSFTLRKGEILG 285
Query: 337 LAGLLGSGRTETARLLFGADRADSGTILVEGRPVRLRSPRDAVRHGIGYCAEDRKKEGIV 396
AGL+G+GRTE AR +FGAD +SG I V+G +++ P DAVRH IGY +EDRK+ G+
Sbjct: 286 FAGLMGAGRTEVARAVFGADPVESGEIFVKGNKAQIKRPSDAVRHSIGYLSEDRKRFGLA 345
Query: 397 AELSIRDNILLA-LQARRGWWRKISRQRARELADLWIERLGIKAADAEQPIGLLSGGNQQ 455
+ + NI+++ L + R + R+ A +I L I+ QP+ LLSGGNQQ
Sbjct: 346 TGMDVESNIVMSDLGKFLSLNIFLRRMQIRKRAAHFINLLAIRTPSPTQPVRLLSGGNQQ 405
Query: 456 KALLARWLATDPKLLILDEPTRGIDVAAKFDIMDRLLALCASGLSILFISSEISEVLRVS 515
K ++A+WL D +L DEPTRGIDV AK +I L AL A G +I+ ISSE+ E+LR+S
Sbjct: 406 KIVIAKWLERDCDVLFFDEPTRGIDVGAKSEIYKLLRALAAQGKAIVMISSELPEILRMS 465
Query: 516 HRVAVLRDRRKIAEVAGKASNEDNIYRL 543
R+ V+ + R E++ + ++ I L
Sbjct: 466 DRIVVMCEGRITGELSASEATQERIMHL 493
Score = 90.9 bits (224), Expect = 1e-22
Identities = 60/225 (26%), Positives = 114/225 (50%), Gaps = 4/225 (1%)
Query: 322 MQPIDLDVQPGQILGLAGLLGSGRTETARLLFGADRADSGTILVEGRPVRLRSPRDAVRH 381
+ + ++ G++ L G G+G++ ++L G DSG IL +G+PV SP +A
Sbjct: 20 LHEVQFELMAGEVHALMGENGAGKSTLMKILAGVYTRDSGEILYDGKPVDFTSPGEAQAL 79
Query: 382 GIGYCAEDRKKEGIVAELSIRDNILLALQARRGWWRKISRQRARELADLWIERLGIKAAD 441
GIG ++ + ++ L++ N+ + + R + R A + R+ + D
Sbjct: 80 GIGIIHQELQ---LMNHLTVAQNMFIGREPRGRLGLFLDEDRLNAQAREILTRMHVNL-D 135
Query: 442 AEQPIGLLSGGNQQKALLARWLATDPKLLILDEPTRGIDVAAKFDIMDRLLALCASGLSI 501
+ L+ +QQ +A+ L+ D ++LI+DEPT ++ A ++ + L G+ I
Sbjct: 136 PRTVVDSLTVASQQMVEIAKALSFDSRVLIMDEPTSALNDAEIAELFRIIRQLKERGVGI 195
Query: 502 LFISSEISEVLRVSHRVAVLRDRRKIAEVAGKASNEDNIYRLIAG 546
++IS ++ E+ ++S RV VLRD +A VA S+ I ++ G
Sbjct: 196 IYISHKMDELKQISDRVTVLRDGEYVATVATAESSVPAIIGMMVG 240
Score = 73.2 bits (178), Expect = 2e-17
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 7/232 (3%)
Query: 58 LQRVDFRLFPGEIHTLMGQNGAGKSTLINVLTGVLAPDEGTIRLGGELVAFASPQEAEGA 117
++ V F L GEI G GAG++ + + G + G I + G P +A
Sbjct: 271 VRNVSFTLRKGEILGFAGLMGAGRTEVARAVFGADPVESGEIFVKGNKAQIKRPSDAVRH 330
Query: 118 GVRTLYQE---VNLCPNLSVAENIFAGRQPRRFGA---IDWPDIKRRAQAALARLDV-TL 170
+ L ++ L + V NI + + I++RA + L + T
Sbjct: 331 SIGYLSEDRKRFGLATGMDVESNIVMSDLGKFLSLNIFLRRMQIRKRAAHFINLLAIRTP 390
Query: 171 DVTRSLDAYPIAVQQMVAIARALSVDARVLILDEPTSSLDDGEVSQLFKILRHLKQSGIA 230
T+ + QQ + IA+ L D VL DEPT +D G S+++K+LR L G A
Sbjct: 391 SPTQPVRLLSGGNQQKIVIAKWLERDCDVLFFDEPTRGIDVGAKSEIYKLLRALAAQGKA 450
Query: 231 ILFVTHFIEQTYAISDRITVMRNGEREGEYLARDLPADQLVSKMVGHERMSA 282
I+ ++ + + +SDRI VM G GE A + ++++ E + A
Sbjct: 451 IVMISSELPEILRMSDRIVVMCEGRITGELSASEATQERIMHLATQRETLKA 502