Pairwise Alignments

Query, 321 a.a., glycine/betaine ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

Subject, 315 a.a., Substrate-binding region of ABC-type glycine betaine transport system from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  310 bits (793), Expect = 4e-89
 Identities = 162/305 (53%), Positives = 204/305 (66%), Gaps = 7/305 (2%)

Query: 21  AAVTALPAFAQ--DPAACRAVHFADIGWTDITSTTALASTVFEGLGYQPVTTVASVPISF 78
           AA   +P  AQ  +P AC  V+F+D+GWTDIT TTA+ S V E LGY+  TT+ SVP+++
Sbjct: 10  AATLCMPVLAQAAEPEACHTVNFSDVGWTDITVTTAVTSAVLESLGYKTKTTMISVPVTY 69

Query: 79  AGLKS-KQLDVSLGYWWPVQEKAIAPFVDSKSIQVLQPPNLTGAKATFAVPSYEYDAGLK 137
             L   K +DV LG W P  E  I P+ ++ +++ ++  NL  AK T AVP   YD GL 
Sbjct: 70  KSLADGKNMDVFLGNWMPTMENDIKPYREAGTVETVRA-NLENAKYTLAVPEALYDKGLH 128

Query: 138 TFADIAKHRDQLDGKIYGIEPGSSANAAIQKMIANNQFGL--GGFKLIESSEAGMLVSVD 195
            FADIAK + +L GKIYGIEPG+  N  IQ MI  N FGL   GFK++ESSEA ML  VD
Sbjct: 129 DFADIAKFKKELGGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSEAAMLSQVD 188

Query: 196 RAIREKKWVVFLGWEPHPMNIQIDMKYLTGSDGVFGPNDGEARVYTLTSPDFLTRCPNAG 255
           RA++ K  VVFLGWEPHPMN +  MKYLTG D  FGPN G+A +YT T   +   C N G
Sbjct: 189 RAVKRKNDVVFLGWEPHPMNTRFKMKYLTGGDDFFGPNYGQATIYTNTRKGYSQECSNVG 248

Query: 256 KLVSNLRFSTQLENVVMQSVM-NKEKPADAAKAYLKKNPQVLDAWLAGVKTYDGKDGLPA 314
           +L+ NL F+  +E+ +M +V+ +K KP  AAKA++KKNPQVLD WLAGV T DGK GL A
Sbjct: 249 QLLKNLSFTLNMESTLMGNVLDDKMKPDAAAKAWIKKNPQVLDTWLAGVNTVDGKPGLEA 308

Query: 315 VKAYL 319
            KA L
Sbjct: 309 AKAKL 313