Pairwise Alignments

Query, 538 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

Subject, 535 a.a., ABC transporter substrate-binding protein from Escherichia coli ECRC98

 Score =  340 bits (872), Expect = 8e-98
 Identities = 195/537 (36%), Positives = 286/537 (53%), Gaps = 6/537 (1%)

Query: 6   VYTTALAALV-LTFAPSAFAVTVPPGVTLAASQEMTRQVPGETESLDPAHIESWTGNTIG 64
           +YT  L  LV L  A   +A  VP    LA  Q        +  +LDP  +E  T   I 
Sbjct: 1   MYTRNLLWLVSLVSAAPLYAADVPTNTQLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIV 60

Query: 65  LDLFEGLTRMDASGAIVPGVAESWS-RSGPNTWVFKLRHDARWSNGQPVTASDFVYSWQR 123
           LDLFEGL  MD  G + P  AE W    G   ++F LR   +WS+GQP+TA DFV  WQR
Sbjct: 61  LDLFEGLVWMDGEGQVQPAQAERWEILDGGRRYIFHLRSGLQWSDGQPLTAEDFVLGWQR 120

Query: 124 VLDPKTGSKYT--VLVEFVKNAKAILAGKAPLSSLGVRAVDPYTLEVTTEVPATFFPQLT 181
            +DPKT S +   +    + NA AI+AGKA ++SLGV+A D  TLEVT E P  +F  + 
Sbjct: 121 AVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTML 180

Query: 182 AMATMTPVNRAVVTKFDGDWTRPGNFVGNGPYALTDWQPSNRLVATKSPTYWNNGKVVIT 241
           A  T+ PV   V+ K    W++P N V NG + L  W  + ++ A K+P Y +    V+ 
Sbjct: 181 AWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDQWVVNEKITARKNPKYRDAQHTVLQ 240

Query: 242 KVTYLPIENDETAMRMYQAGQFDYTYSIPSGVYSQVSKQFGPELKTGLQIATYYYSLNND 301
           +V YL ++N  T    Y+AG+ D T+ +P+     + K    E++   ++ + YY+ N +
Sbjct: 241 QVEYLALDNSVTGYNRYRAGEVDLTW-VPAQQIPAIEKSLPGEIRIIPRLNSEYYNFNLE 299

Query: 302 DPAFKDKRVRQALAMVLDRDLLTKRLTADGEVPMYGLIAKGTEGSGVFTPEWANWPMAKR 361
            P F D RVR+AL + +DR L+ +++      P   L     +G    T +    PM++R
Sbjct: 300 KPPFNDVRVRRALYLTVDRQLIAQKVLGL-RTPATTLTPPEVKGFSATTFDELQKPMSER 358

Query: 362 VDYARNLLKTAGYSDAKPLTFTLTYNTNDLHKKVALFATSEWRTKLGVTAKLENVEYKVL 421
           V  A+ LLK AGY  + PL F L YN  DLH+K A+  +SEW+  LG    L  +E+K  
Sbjct: 359 VAMAKALLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKTY 418

Query: 422 LKQRHDGKVQASRDGWFVDYNDANSFFDLIRCNSVQNDQHYCNPQVDKLIDEGNQQLDDA 481
           L  R  G    SR  W   YNDA+SF + ++ +S +N  H+ N Q D L+++  Q  D  
Sbjct: 419 LDARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQAMQITDAT 478

Query: 482 KRTALFTQAHDLAMNDYPVVSLFQYSADRLVKSYVGGYKPTNYLDMRATQDMYLTKH 538
           KR AL+ QA  +     P++ ++     +L+K YVGG+   N  D   ++++Y+  H
Sbjct: 479 KRNALYQQAEVIVNQQAPLIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYIKAH 535