Pairwise Alignments

Query, 538 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

Subject, 543 a.a., oligopeptide ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score =  457 bits (1175), Expect = e-133
 Identities = 234/540 (43%), Positives = 318/540 (58%), Gaps = 5/540 (0%)

Query: 2   KTPFVYTTALAALVLTFAPSAFAVTVPPGVTLAASQEMTRQVPGETESLDPAHIESWTGN 61
           K   V    LAAL+      A A  VP GVTLA  Q + R    E +SLDP  IE    +
Sbjct: 6   KRSLVAAGVLAALMA--GNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGVPES 63

Query: 62  TIGLDLFEGLTRMDASGAIVPGVAESWSRSGPNTWVFKLRHDARWSNGQPVTASDFVYSW 121
            I  DLFEGL   D  G   PGVAESW       W F LR DA+WS+G PVTA DFVYSW
Sbjct: 64  NISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFVYSW 123

Query: 122 QRVLDPKTGSKYTVLVEF--VKNAKAILAGKAPLSSLGVRAVDPYTLEVTTEVPATFFPQ 179
           QR +DP T S Y   +++  +     IL GK P++ LGV+A+D +TLEVT   P  +F +
Sbjct: 124 QRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPYFYK 183

Query: 180 LTAMATMTPVNRAVVTKFDGDWTRPGNFVGNGPYALTDWQPSNRLVATKSPTYWNNGKVV 239
           L    + +PV +A + KF   WT+PGN V NG Y L DW  + R+V  +SPTYWNN K V
Sbjct: 184 LLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNAKTV 243

Query: 240 ITKVTYLPIENDETAMRMYQAGQFDYTYS-IPSGVYSQVSKQFGPELKTGLQIATYYYSL 298
           I +VTYLPI ++ T +  Y++G+ D TY+ +P  ++ ++ K+   E+     + TYYY +
Sbjct: 244 INQVTYLPIASEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPDEVHVDPYLCTYYYEI 303

Query: 299 NNDDPAFKDKRVRQALAMVLDRDLLTKRLTADGEVPMYGLIAKGTEGSGVFTPEWANWPM 358
           NN  P F D RVR AL + +DRD++  ++ A G++P YG     T+G+ +  PEW  W  
Sbjct: 304 NNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGDMPAYGYTPPYTDGAKLTQPEWFGWSQ 363

Query: 359 AKRVDYARNLLKTAGYSDAKPLTFTLTYNTNDLHKKVALFATSEWRTKLGVTAKLENVEY 418
            KR + A+ LL  AGY+  KPLT  L YNT+DLHKK+A+ A+S W+  +GV  KL N E+
Sbjct: 364 EKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVNQEW 423

Query: 419 KVLLKQRHDGKVQASRDGWFVDYNDANSFFDLIRCNSVQNDQHYCNPQVDKLIDEGNQQL 478
           K  L  RH G    +R GW  DYN+  SF + +  NS  N  HY +P  D ++ E  +  
Sbjct: 424 KTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVT 483

Query: 479 DDAKRTALFTQAHDLAMNDYPVVSLFQYSADRLVKSYVGGYKPTNYLDMRATQDMYLTKH 538
           D+A+RTAL+T+A      D  +V ++ Y   RLVK +VGGY   + LD   T++MY+ KH
Sbjct: 484 DEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH 543