Pairwise Alignments

Query, 460 a.a., sensor histidine kinase from Burkholderia phytofirmans PsJN

Subject, 488 a.a., Sensor histidine kinase RcsC from Methylophilus sp. DMC18

 Score =  223 bits (569), Expect = 8e-63
 Identities = 137/442 (30%), Positives = 239/442 (54%), Gaps = 7/442 (1%)

Query: 5   SLRGRLLWWLLLPLAAFVSISGVISYRNAQTTADLVQDNALLSSMRIIGEDIDWDNGN-V 63
           SL+ +L  WLLLP+   + +S  +SY  A   A    D ALL ++  + +++  D+ N V
Sbjct: 6   SLKSQLRLWLLLPMLVVLGVSAALSYSRALLYATQAYDQALLRTVLALADEVIIDSHNQV 65

Query: 64  SIQIPPAALELFESPEQDSVFYRVEASGHRLVEGSLELPLPPQ--TGDKPTLYMTRLEDG 121
            I+IP  A  L    E D ++ ++     +LV G   LPLP Q   G++   Y +  + G
Sbjct: 66  KIEIPEVASHLLSYNEGDHIYIKISDPKGKLVFGEAHLPLPKQLPAGNQQVYYNSHYK-G 124

Query: 122 RAVRAVAYVRQLYDTGRTEEVIVAVAKTEGSRDAMVWRLLRPQLFGEVLTLVLAMVFVYL 181
            A+RAV +     +      +++++A+T G RDAMV  ++   L  +VL ++LA + + L
Sbjct: 125 EAIRAVTFGLPESEAANARNILISMAETTGKRDAMVAEMVEEMLLPQVLMMLLAAIVIEL 184

Query: 182 GLTFELRPLMKVKDDVADRNPSQLQPIRVARLHVELRPIVDAINQCIARMGQQAATQRQF 241
           G+ F L+PL  +++ +  R+   L  +       EL+P++ A+N  +AR+      Q+QF
Sbjct: 185 GIYFALKPLQDLRESLHQRSYRDLSALDTQATPNELQPLLQAMNALLARVKAGLQQQQQF 244

Query: 242 ISDAAHQMRTPLTLLVAQIQFARQRENRDAPLAEALAGMHKSSRKLTTLTDKLLLLAQAE 301
           I+DA+HQ+RTP+  L  Q + A + +  +A + E L  M +S+ +L+ L  +LL +A+ +
Sbjct: 245 IADASHQLRTPIAGLQTQAELALRSQPPEA-IQEPLNYMLRSTTRLSHLIQRLLTMARTD 303

Query: 302 SAAPVSACERVDLSALIAGVLEELIAFAQSREIDLGAELEDGM-VVTGDEALTAALVTNL 360
           +A      + V L+ +I+      I  A +++++L   +E     V GD  + + L+ NL
Sbjct: 304 AAVSQLQFQPVSLTKIISDECARWIGPASNKQLELDVMIETQQDQVLGDALMLSELLNNL 363

Query: 361 VDNALRYTQAGGRVTVQTTRLNDIAIVRVIDNGPGIKPDARARVFERFYRAS-SHADGTG 419
           ++NA++YT   G + ++  +     ++ V D+G GI  D    VFERF+R   +  +G G
Sbjct: 364 LENAIQYTPKQGLLQIRLLQAGKFLVLEVADSGIGIPADQTTLVFERFHRLDPNQGNGCG 423

Query: 420 LGLPIVREIAHRQGGTVTLESG 441
           LGL IV EIA     ++T+  G
Sbjct: 424 LGLAIVAEIAEHHNASITVTPG 445