Pairwise Alignments

Query, 477 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 284 a.a., Type IV pilus biogenesis protein PilF from Variovorax sp. SCN45

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 18/208 (8%)

Query: 273 LANQGLSKEAEQQTREALTVYQHSAVLHASLGIALEQQHRIDDALDALRAGAREKSKTAE 332
           LA+    K  +  T    +  Q  A L   L     +Q + + ALD ++         ++
Sbjct: 42  LADTSSGKGVDIVTESDESSRQRRARLRMELASGYFEQGQTNVALDEIKQALAADPNNSD 101

Query: 333 NLRLLGDVLLHANRYSEALDAFKQADKMKPDSVDNLHDWGEALVTVGRYDEAIEKLSRAV 392
              L G V +  +    A D+F++A  + P   +  H++G  L    RY +A  + + A+
Sbjct: 102 AYNLRGLVYMRLDDAGMAEDSFRRAIAINPRDPNTRHNYGWLLCQQNRYGDAATQFNEAL 161

Query: 393 ALRPDLAPSYAEWGRALD-------RKGDRSGASRKFAQALQLDAGTLSVRESHLARLAR 445
           A+     PSYA+  + L        + G R+ A R   QA ++DA    V  +    LA+
Sbjct: 162 AV-----PSYADRAKTLMTRGVCELKAGQRAQAERTLQQAYEIDASNPVVGFNLALVLAQ 216

Query: 446 AAQGGNRPDASKPDDGVRPVSNPPAPLA 473
                 R + S+    +R V+N P+  A
Sbjct: 217 ------REEWSRAQFYIRRVNNSPSASA 238



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 22/94 (23%), Positives = 40/94 (42%)

Query: 243 YGEIVAIYDEVLALPASEQGEWALAGKAWLLANQGLSKEAEQQTREALTVYQHSAVLHAS 302
           YG+    ++E LA+P+       L  +       G   +AE+  ++A  +   + V+  +
Sbjct: 150 YGDAATQFNEALAVPSYADRAKTLMTRGVCELKAGQRAQAERTLQQAYEIDASNPVVGFN 209

Query: 303 LGIALEQQHRIDDALDALRAGAREKSKTAENLRL 336
           L + L Q+     A   +R      S +AE L L
Sbjct: 210 LALVLAQREEWSRAQFYIRRVNNSPSASAETLWL 243