Pairwise Alignments

Query, 786 a.a., general secretion pathway protein GspD from Burkholderia phytofirmans PsJN

Subject, 742 a.a., Secretin XpsD from Xanthobacter sp. DMC5

 Score =  221 bits (563), Expect = 1e-61
 Identities = 196/698 (28%), Positives = 311/698 (44%), Gaps = 69/698 (9%)

Query: 17  TAQT-AQAQVTLNFVNADIDQVAKAIGA-ATGKTIIVDPRVKGQLNLVSENAVPEDQALK 74
           TAQ  A     LNF N  +  VAK +     G  +I+DPRV+G ++L S   V       
Sbjct: 78  TAQRGADGGYDLNFENTPVTTVAKVVLTDILGANVIIDPRVQGTISLSSARPVARTDLAY 137

Query: 75  TLQSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNTPVARGDQVVTQVFVLKNESA 134
            L+SALR  G ALV+D    +++P  +A   G  T VG +    G  V   V  L+  SA
Sbjct: 138 VLESALRSNGIALVKDASGYQLMPLTEAAGSGA-TDVGTSRPEPGYGV--SVVPLRYVSA 194

Query: 135 NNLLPVLRPLISPNNTVAAYPANNTIVVTDYADNVRRIAQIIQGVDS--AAGQSVSVVQL 192
             L+PV+    +    V   P  N +++   A   +         D+    GQSV +  L
Sbjct: 195 ETLMPVIDSFATRAGMVRVDPGRNVLLIQGTAQERQAAINTALSFDADWMRGQSVGIYPL 254

Query: 193 KNANAIDIATQLNKMLDPGSIGSTDATLKVSVTADPRTNSLLIRASNGARLAAARTLAKE 252
           +N+    +  +L  +LD G  G +   +K    A  R NS+++ A     L  A T  + 
Sbjct: 255 RNSAPEPLIAELETLLDAGEGGLSHKMVKFQ--AINRMNSVMVVAKKPDLLRTAATWIER 312

Query: 253 LDTPTTMPGNIHVVPLRNADATKLAKTLRGMFG----KGGDSGSSSNSNDANSFNQNNSG 308
           LD   +  G + V  LR  +A + A+ L  +F     +G D  S+  +  + S   +N G
Sbjct: 313 LDRSDSSVG-VRVYRLRYGEARQTARVLNELFNGTSSQGLDQASNQIAPGSGSSASSNGG 371

Query: 309 GIGGNNSTGSS-GTPPLPSGGLGSSSLASPM----------GGSGSGGGYGAGGSNNGGF 357
           G  G  S     G  P  + G G  + A P+          GGSG  GG GA  S     
Sbjct: 372 GSNGPMSVQQRLGQTPTQNQGQGGQN-AQPVNRGETDNELQGGSGPSGGGGAILS----- 425

Query: 358 GNDKEKSDDNQQGGMIQADSATNSLIITAAEPVYRNLRAVIDQLDARRAQVYLEALIVEL 417
                       G  I AD   NSL+I A++  YR +   + QLD  + QV +EA + E+
Sbjct: 426 ------------GIRITADQVNNSLLIYASQENYRIIERTLLQLDQPQLQVAIEATVAEV 473

Query: 418 NSNTSGNLGIQWQVANNSIFAGTNLQTGSSNSIVNLTAAAVAAGSTGGLAGALGNGTLQQ 477
             N     G+Q+ + +  +  G N     + S VN  ++ +   +   +           
Sbjct: 474 TLNDQLAYGVQFFLTSKDLGLGKN-----NGSAVNTLSSEITNQAINRVL---------P 519

Query: 478 GLNIGWIHNIFGVQGLGAL-LQALSQTADANVLSTPNLITLDNEEAKIVVGTNVPIQTGS 536
           G N+     + G +    + L AL    D  VLS P+++ +DN++A + VG  VP+ TGS
Sbjct: 520 GFNL-----LIGRENQPKMILDALHTVTDVKVLSNPSVVVVDNQKATLQVGDEVPVSTGS 574

Query: 537 YSNLTSATATSAFNTYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVTGTNNAATNPA 596
            + LTS+   +  NT +  + G+ LHV P++   G ++L +  E S +        ++  
Sbjct: 575 ATVLTSSN--TVVNTIEYKNTGIILHVTPRVNVNGQVRLDIEQEISNVTKQPTANGSSSD 632

Query: 597 G----PEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSEQK 652
           G    P  ++R ++ST+   +G+ ++L GL+ +        VP+L  IP +G  F  +  
Sbjct: 633 GSTLTPTVSQRRVKSTIAVTSGQTVLLAGLISERSDGVRQGVPVLDQIPGVGDAFAHKDT 692

Query: 653 TRNKTNLMVFLRPVIISDRGTAQAVTSNRYDYIQGVQG 690
           T  +T L++F+RP II D   A  V       ++G  G
Sbjct: 693 TVKRTELIIFIRPQIIRDNMDAHTVAEELRAKLKGSVG 730