Pairwise Alignments

Query, 786 a.a., general secretion pathway protein GspD from Burkholderia phytofirmans PsJN

Subject, 703 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

 Score =  189 bits (480), Expect = 4e-52
 Identities = 172/682 (25%), Positives = 294/682 (43%), Gaps = 76/682 (11%)

Query: 18  AQTAQAQVTLNFVNADIDQVAKAI-GAATGKTIIVDPRVKGQLNLVSENAVPEDQALKTL 76
           A+     +  NF +  I+ V  ++ G    +   +   VKG ++  +   V + QAL  L
Sbjct: 82  AKEKGGDIVFNFADQPIEAVINSVMGDLLHENYSIAQGVKGNVSFSTSKPVDKQQALSIL 141

Query: 77  QSALRMQGFALVQDHGVLKVVPEADAKLQGVPTYVGNTPVARGDQVVTQVFVLKNESANN 136
           ++ L     A+++      ++P   A    +   +     + G  +  ++F L+  SA  
Sbjct: 142 ETLLSWTDNAMIKQGDRYVILPANQAVAGKLVPQMNVAQPSSG--LSARLFALRYISATE 199

Query: 137 LLPVLRPLISPNNTVAAYPANNTIVVTDYADNVRRIAQIIQ--GVDSAAGQSVSVVQLKN 194
           +  +L+P    N  +   PA N + +    D +      I    VD   G SV V  L+ 
Sbjct: 200 MQKLLKPFARENAFLLVDPARNVLSLAGTPDELANYQDTIDTFDVDWLKGMSVGVFGLQR 259

Query: 195 ANAIDIATQLNKMLDPGSIGSTDATLKVSVTADPRTNSLLIRASNGARLAAARTLAKELD 254
           A+  ++  QL  M  P S       L+       RTNS++  +S    L+      + +D
Sbjct: 260 ASVAELMPQLQSMFGPDSGMPLAGMLRFLPIE--RTNSVVAISSQPQYLSEVGDWIRTID 317

Query: 255 TPTTMPGNIHVVPLRNADATKLAKTLRGMFGKGGDSGSSSNSNDANSFNQNNSGGIGGNN 314
                   ++V  +RN  A  LAK LR ++G G                           
Sbjct: 318 EGGGNEPQMYVYDVRNMKAADLAKYLRQIYGTGAIKDD---------------------- 355

Query: 315 STGSSGTPPLPSGGLGSSSLASPMGGSGSGGGYGAGGSNNGGFGNDKEKSDDN------- 367
                 TP   + GL +++L+S   G         G  NN     + E  +         
Sbjct: 356 ------TPAKVAPGLRTTTLSSLNSG---------GLQNNPPAAEESEPQEKEVAPTSAL 400

Query: 368 QQGGMIQADSATNSLIITAAEPVYRNLRAVIDQLDARRAQVYLEALIVELNSNTSGNLGI 427
           + G  I A  ++N L++      ++ + A I +LD    QV +E  I+E+      +LG+
Sbjct: 401 EAGTRITAQKSSNQLLVRTRPAQWKEIEAAIKRLDNPPLQVQIETRILEVKLTGELDLGV 460

Query: 428 QWQVANNSIFAGTNLQTGSSNSIVNLTAAAVAAGSTGGLAGALGNGTLQQGLNIGWIHNI 487
           QW +   +         G+S+S    T  A A+GS G    ALG G    G      ++ 
Sbjct: 461 QWYLGRLA---------GNSSS----TTVANASGSQG----ALGGGGAGLGATDSLFYS- 502

Query: 488 FGVQGLGALLQALSQTADANVLSTPNLITLDNEEAKIVVGTNVPIQTGSYSNLTSATATS 547
           F    L   L AL       VLS P+L+ ++N+ A+I VG N+PI   + + + +  A +
Sbjct: 503 FVSSNLQVALHALETNGRTQVLSAPSLVVMNNQPAQIQVGDNIPI---NQTTVNTGDADT 559

Query: 548 AFNTYDRVDVGLTLHVKPQITDGGILKLQLYTEDSAIVTGTNNAATNPAGPEFTKRSIQS 607
             ++ + V  G+ L V P+I  GG++ + +  + S     + N+ T P  P  + RS+ +
Sbjct: 560 TLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVSDAENQSTNSDT-PVNPRISTRSVST 618

Query: 608 TVLADNGEIIVLGGLMQDNYQVSNSKVPLLGDIPWIGQLFRSEQKTRNKTNLMVFLRPVI 667
            V   +G+ ++LGGL++ + Q S S VP LG IP +  LF S  K++++T L+V + P +
Sbjct: 619 QVAVQSGQTVLLGGLIKQDNQESVSAVPYLGKIPGLRWLFGSTSKSKDRTELIVLITPKV 678

Query: 668 ISDRGTAQAVTSNRYDYIQGVQ 689
           I+  G A+ VT    DY Q +Q
Sbjct: 679 ITSSGQARQVTD---DYRQQMQ 697