Pairwise Alignments

Query, 786 a.a., general secretion pathway protein GspD from Burkholderia phytofirmans PsJN

Subject, 683 a.a., Pullulanase secretion envelope PulD from Alteromonas macleodii MIT1002

 Score =  212 bits (540), Expect = 5e-59
 Identities = 138/374 (36%), Positives = 203/374 (54%), Gaps = 39/374 (10%)

Query: 356 GFGNDKEKSDDNQQGGMIQADSATNSLIITAAEPVYRNLRAVIDQLDARRAQVYLEALIV 415
           G G    ++  N++   I A   +N+++ITA   + R+L  V+ QLD RRAQV +EA+IV
Sbjct: 299 GSGTTSRRASSNREIS-IDAHEDSNAIVITAEPDMMRSLEEVVRQLDIRRAQVQVEAIIV 357

Query: 416 ELNSNTSGNLGIQW--------QVANNSIFAG------------TNLQTGSSNSIVNLTA 455
           E+       LG+QW        Q  N  +  G            TN +T  S+     T 
Sbjct: 358 EVFEGDGTTLGVQWVSEQGGGTQFNNGVVPVGSLAVALKQAEEDTNTETYVSDDGSPYTV 417

Query: 456 AAVAAGSTGGLAGALGNGTLQQGLNIGWIHNIFGVQGLGALLQALSQTADANVLSTPNLI 515
                G    LA  LG      GL  G I N     G GA++QA+S   ++N+L+TP+L 
Sbjct: 418 TNTREGDYTALASLLGGAN---GLIAGVIEN-----GWGAVVQAVSTDTNSNILATPHLT 469

Query: 516 TLDNEEAKIVVGTNVPIQTGSYSNLTSATATSAFNTYDRVDVGLTLHVKPQITDGGILKL 575
           T+DNEEA  +VG  VPI TG+    T +  ++ F T DR +VG+ L V PQI +G  ++L
Sbjct: 470 TMDNEEAFFIVGQEVPIITGT---TTGSNNSNPFQTVDRQEVGIKLKVTPQINEGDAVQL 526

Query: 576 QLYTEDSAIVTGTNNAATNPAGPEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVSNSKVP 635
            +  E S++   T+            KR I++TV+ D+G  IVLGGL+ ++ Q S SKVP
Sbjct: 527 LIEQEVSSVSGATS------VDISINKREIKTTVIVDDGGTIVLGGLIDEDVQESESKVP 580

Query: 636 LLGDIPWIGQLFRSEQKTRNKTNLMVFLRPVIISDRGTAQAVTSNRYDYIQGVQGAYKQD 695
           LLGDIP +G LF+S   ++ K NLMVFL+P I+ D  T  A++  +Y+YI+ +Q   +Q+
Sbjct: 581 LLGDIPILGHLFKSTSTSKRKRNLMVFLKPTIVRDGATMNAISHRKYNYIRALQLKRQQE 640

Query: 696 N-NLMKDNDDPVVP 708
             +LM   + P +P
Sbjct: 641 GVSLMPYEETPTIP 654



 Score =  127 bits (320), Expect = 2e-33
 Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 9/304 (2%)

Query: 3   LRRVATALLVAGLITAQTAQAQVTLNFVNADIDQVAKAIGAATGKTIIVDPRVKGQLNLV 62
           L R++TA+  A L  + TA A+   NF + DI++    +G    +TIIVDP V+G++++ 
Sbjct: 10  LSRLSTAMCTALLCFSVTA-AEYMPNFKDTDINEFINIVGKNLERTIIVDPNVRGKISVR 68

Query: 63  SENAVPEDQALKTLQSALRMQGFALVQ-DHGVLKVVPEADAKLQGVPTYVGNTPVARGDQ 121
           S + + EDQ  +   + L++  FA+V+   G+LKVV   DAK   +P   G      GD+
Sbjct: 69  SYDMLDEDQYYQFFLNVLQVYDFAVVEMPSGILKVVRSKDAKTSNIPVVEGAN--RDGDE 126

Query: 122 VVTQVFVLKNESANNLLPVLRPL--ISPNNTVAAYPANNTIVVTDYADNVRRIAQIIQGV 179
           ++T+V  + N     L P+LR L   +    V ++  +N +++T  A  V R+ +II+ V
Sbjct: 127 MITRVVPVYNVPVRELAPILRQLNDQAGGGNVVSHDPSNVMMLTGRAAVVNRLVEIIERV 186

Query: 180 DSAAGQSVSVVQLKNANAIDIATQLNKMLDPGSIGSTDATLKVSVTADPRTNSLLIRASN 239
           D A  + V +V+L+ A+A ++   ++ +       +T    +  V AD RTNS+++    
Sbjct: 187 DRAGDEEVEIVKLRYASASEMVRIIDSINKSQGKANTGTKSEPRVVADDRTNSVIVSGDI 246

Query: 240 GARLAAARTLAKELDTPTTMPGNIHVVPLRNADATKLAKTLRGMFG--KGGDSGSSSNSN 297
            AR      L + +D      GN  V+ L  A A  L K L+G+    +  + GS + S 
Sbjct: 247 KARQRLI-NLIQRMDQELESNGNTRVLFLNYAKAEDLVKVLQGVSASIQAEEQGSGTTSR 305

Query: 298 DANS 301
            A+S
Sbjct: 306 RASS 309