Pairwise Alignments

Query, 790 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 829 a.a., TPR domain protein, putative component of TonB system from Variovorax sp. SCN45

 Score =  171 bits (434), Expect = 1e-46
 Identities = 198/771 (25%), Positives = 309/771 (40%), Gaps = 79/771 (10%)

Query: 26  VLQTALDHHHKGEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPLFEQCLG 85
           +L+  L  H  G F +A  +Y  +L   P+HAD L+  G  L +  R   AL    + + 
Sbjct: 20  LLEQGLTQHRMGRFTEALRIYENLLSQFPEHADALHLTGEALYRQGRPKLALNYVNRAIA 79

Query: 86  LHPHNGQYWAAYISALIDAGETAAAWLALEMGQKQGLKGPAVDGLIVRMANPGKVIHTLP 145
             PH+  Y+    +  +  G  A A   L    K     P     +  +    K      
Sbjct: 80  KSPHHF-YFNTRATIFMHMGLLAEAQQDLRRAIKALPNYPEAYVNLSAVYRQQKKFRQAR 138

Query: 146 VAAQK-----PQAEPAA---ATETPPAAESTRTTIASGRRVSQQETNRYTALYNKGNVVE 197
            AA +     PQ+ PAA   A       +     +   R+  + ++    A  N G +  
Sbjct: 139 EAAGEATRLAPQS-PAAWNNAGAIDMEQDRLEEAVEQFRQALKLDSGYIAAHKNIGKIRA 197

Query: 198 AVK-LARSLT-----QRFPADGNSWRWLGIALHRLGRYDEALAPLRKAAELFPEELESRT 251
             K  A +LT     Q  P D  +   L  AL   GR +EA+AP+++A      E+ +R 
Sbjct: 198 HQKDWAGALTSLEQAQTDPPDFEAAYLLSRALIACGRNEEAIAPMQRAMRHSTVEVRARA 257

Query: 252 VLAD---TLRLKGLPA----------ETEQECRKILAINPDYAEAQRIFGMSLVHQGRVA 298
            L+D      L G+ A          E+E+  +  L   P+        G +   QGR  
Sbjct: 258 -LSDPEAVAALYGVCAALEGAAMRFDESEELYKLALESMPEQEALLNNLGATNFRQGRYD 316

Query: 299 EGLAAARRAIELAPNNSTAYSTLGVLLLDLGFVSEAEKEFRAALEKDP------------ 346
             +   ++A+EL P    A   LGV  +  G    A  EF   L  DP            
Sbjct: 317 AAIEVLKKALELHPRQVLARCNLGVTYVMAGQSEAAIAEFEQCLRDDPDFMPAMVWLLGE 376

Query: 347 KDHIAANNFLFTLS-------HNPEIDH-GTLFAEHTNFARQHE------------DPVR 386
           K HIA    +  L         NP  D   + F   +N+   H             D   
Sbjct: 377 KAHIARWEGVPELRAKIAARLDNPVDDQTASSFILMSNYDDAHRLMHWTQRSATLADRNT 436

Query: 387 AQWP-RHVNKRSPDRKLKIGLVSGDLFRHAVASYLLPIME-HLAKDPNLSLHVYNNHIAE 444
           A  P      R    ++++G  S D   H VA     +   H  KD  + ++ Y     +
Sbjct: 437 AIKPFADAGARRTSPRIRVGYYSFDFRNHPVAHLTAELYSLHDRKDFEVFVYSYG---PD 493

Query: 445 DDYTQLLRNCADEWHQIT--GMPDAQLANKIRDERIDILFDLSGHTGRNRLLTFARKPAP 502
           D +    R  A   H +   G    Q+A +IR++ IDIL DLSG T   +    A   AP
Sbjct: 494 DGHPARARIAASAEHFVDMHGQSIQQMAERIREDEIDILVDLSGDTRGAKPQVMAYHTAP 553

Query: 503 IQVTWMGYPGTTGLSAMDYYLADKYGVPFGPAENQFSEKIVHLPSSATFLPEQSAPPVNI 562
            Q+ W+GY GT+G +  DY ++D +  P G  E+ ++EK++ LP   TF    +  PVN 
Sbjct: 554 AQLMWLGYMGTSGSTNYDYLVSDGFLSPQG-TEDCYTEKLLRLPE--TFQVIDTKRPVNP 610

Query: 563 LPAMHNGY------VTFGSFNRLNKLRRDVIALWAELLRAQPTAKMLLGAIATDEDEQLL 616
             A    +          +F++  K++ +    W  ++R  P + + L       +  L 
Sbjct: 611 HKATREAHGLPEDAFVLCNFSQSFKIQPETFDAWVRIVRGIPNSVLWLAQGPNGFERNLR 670

Query: 617 IDWFAGEGIERERLMFRRRSSIPVYLQQHFHVDICLDTFPYTGSTTVLNSLWMGVPTLTI 676
             W    G+  ERL+   R  +  +L +    D+ +DTFPY+   T  + LW GVP L +
Sbjct: 671 AHWEKA-GLPAERLIVSPRMPVDQHLARIGLADLFIDTFPYSSGATANDVLWSGVPLLAL 729

Query: 677 AGDTLASRAGTTWMSHVGLDDFVVANKEEFVARGVALASDLPALADIRTGL 727
            G T+ SR   + +  +GL + V  N  E+V + +  A+    LA +R  L
Sbjct: 730 TGSTMVSRMAGSLLGAIGLPELVATNHAEYVQKAIHYATHPDELAALRARL 780



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 15  PEQQLEQDIALVLQTALDHHHKGEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTA 74
           PEQ+     AL+      +  +G ++ A  + +  L+ +P+      NLGV      ++ 
Sbjct: 296 PEQE-----ALLNNLGATNFRQGRYDAAIEVLKKALELHPRQVLARCNLGVTYVMAGQSE 350

Query: 75  EALPLFEQCL 84
            A+  FEQCL
Sbjct: 351 AAIAEFEQCL 360