Pairwise Alignments

Query, 790 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 591 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score =  186 bits (471), Expect = 4e-51
 Identities = 162/595 (27%), Positives = 253/595 (42%), Gaps = 30/595 (5%)

Query: 189 LYNKGNVVEAVKLARSLTQRFPADGNSWRWLGIALHRLGRYDEALAPLRKAAELFPEELE 248
           L+  G++  A  L +SL +  P   +     G+   + G+  EA   +R A    P+   
Sbjct: 12  LHLSGDLDGAAGLYKSLLKIAPLHPDGLHLSGLVAMQKGQLKEAERFIRGAIAASPKAAA 71

Query: 249 SRTVLADTLRLKGLPAETEQECRKILAINPDYAEAQRIFGMSLVHQGRVAEGLAAARRAI 308
               LA  L   G P E  +  RK + ++  Y +  R         G       A    +
Sbjct: 72  FHGNLATVLMSDGRPNEAMECYRKAVQLDDSYVDGWRNMAALAAQTGDHETSALAYSNVV 131

Query: 309 ELAPNNSTAYSTLGVLLLDLGFVSEAE-----KEFRAALE--KDPKDHIAANNFLFTLSH 361
            L          LG L L+L  V + +     KE  AAL   +  K    A   L     
Sbjct: 132 RLT--GGADGGALGYLGLELAVVCDWDNLPVVKEAIAALPSWRTGKSLPVAPFTLLIHDF 189

Query: 362 NPEIDHGTLFAEHTNFARQHEDPVRAQWPRHVNKRSPDR-KLKIGLVSGDLFRHAVASYL 420
           +P        AE    A +    +  +     ++ +P R +L++G +S D   HA A  L
Sbjct: 190 SP--------AELRRHADEAASFIENRVAPMAHQPAPRRPRLRLGYLSEDFHEHATAYLL 241

Query: 421 LPIME-HLAKDPNLSLHVYNNHIAEDDYTQLLRNCADEWHQITGMPDAQLANKIRDERID 479
              +E H      +  + Y  H +     +L   C D W ++  + ++  A +I  + ID
Sbjct: 242 AEALESHDRSRFEIFAYSYGPHESGAVRARLTEAC-DHWVELGPLAESDCAKRIAADGID 300

Query: 480 ILFDLSGHTGRNRLLTFARKPAPIQVTWMGYPGTTGLSAMDYYLADKYGVPFGPAENQFS 539
           IL DL GHTGR R    A +PAPIQV W+G+PGT G + MDY +AD + +P G AE  ++
Sbjct: 301 ILVDLKGHTGRARTAILAARPAPIQVAWLGFPGTFGGTCMDYIIADPFVIPPG-AEGDYA 359

Query: 540 EKIVHLPSSATFLPEQSAPPVNILP------AMHNGYVTFGSFNRLNKLRRDVIALWAEL 593
           E++V LP    + P  S  P  +         +    +    FN   K+  + +A+W  +
Sbjct: 360 EQVVRLP--LCYQPNDSRRPRALTREPKAKWGLPEESLVVAVFNNTFKINAETLAVWISV 417

Query: 594 LRAQPTAKMLLGAIATDEDEQLLIDWFAGEGIERERLMFRRRSSIPVYLQQHFHVDICLD 653
           L+AQP A +            L     +  GI+  RL+F  R S   ++ +    D+ LD
Sbjct: 418 LQAQPDAVLWFVEFHPAATASLRA-MISAVGIDPARLIFAPRLSQAEHMARLSAADLFLD 476

Query: 654 TFPYTGSTTVLNSLWMGVPTLTIAGDTLASRAGTTWMSHVGLDDFVVANKEEFVARGVAL 713
           T+P  G TT  ++LW GVP +   G T ASR   + +  +GLD+ +  ++  + A    L
Sbjct: 477 TWPCAGHTTASDALWAGVPVVAWVGRTFASRVAGSLLHALGLDELITESQGAYHALAQHL 536

Query: 714 ASDLPALADIRTGLRERCAASAAFRPEVVAAGVSRALRIMWQRWCAGEPAAAFEV 768
           A D  AL  +R  L      S  F  +     + +A   MW +W  G     F+V
Sbjct: 537 AKDRAALEQVRQRLWAATQTSPLFDGKAFVGPLEQAFDTMWAKWEKGGKPQGFDV 591



 Score = 34.3 bits (77), Expect = 2e-05
 Identities = 20/80 (25%), Positives = 35/80 (43%)

Query: 26  VLQTALDHHHKGEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPLFEQCLG 85
           +LQ A+  H  G+ + A  LY+++L   P H D L+  G++  Q  +  EA       + 
Sbjct: 5   LLQDAVKLHLSGDLDGAAGLYKSLLKIAPLHPDGLHLSGLVAMQKGQLKEAERFIRGAIA 64

Query: 86  LHPHNGQYWAAYISALIDAG 105
             P    +     + L+  G
Sbjct: 65  ASPKAAAFHGNLATVLMSDG 84



 Score = 29.6 bits (65), Expect = 5e-04
 Identities = 19/78 (24%), Positives = 32/78 (41%)

Query: 36  KGEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPLFEQCLGLHPHNGQYWA 95
           KG+ ++A    R  + A+PK A    NL  +L    R  EA+  + + + L       W 
Sbjct: 49  KGQLKEAERFIRGAIAASPKAAAFHGNLATVLMSDGRPNEAMECYRKAVQLDDSYVDGWR 108

Query: 96  AYISALIDAGETAAAWLA 113
              +     G+   + LA
Sbjct: 109 NMAALAAQTGDHETSALA 126