Pairwise Alignments
Query, 790 a.a., hypothetical protein from Burkholderia phytofirmans PsJN
Subject, 659 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1
Score = 262 bits (669), Expect = 5e-74
Identities = 193/614 (31%), Positives = 280/614 (45%), Gaps = 43/614 (7%)
Query: 183 TNRYTALYNKGNVVEAVKLARSLTQRFPADGNSWRWLGIALHRLGRYDEALAPLRKAAEL 242
TN + +G EA+ L P +W G L LGR +EA +A +L
Sbjct: 46 TNLGVIAHGRGRTGEALTLHGQALALAPQLAEAWCNRGDLLSDLGRLEEAEGDFVRACDL 105
Query: 243 FPEELESRTVLADTLRLKGLPAETEQECRKILAINPD----YAEAQRIF----------- 287
P L + L + +G A+ E R+ A+ P +A+ R
Sbjct: 106 SPALLPAWFNLGNVRLRRGDTAQAEPCYRRAAALAPHLPLIHAQLARCLDAMGQAEGAAD 165
Query: 288 -------------------GMSLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGVLLLDL 328
G GR+ + R AI L P+++ A+ LG +
Sbjct: 166 AMEAAWRLAPDDWRLLTDLGALQQQAGRLHAAQNSLRAAISLNPSHAAAHYNLGNVFYGE 225
Query: 329 GFVSEAEKEFRAALEKDPKDHIAANNFLFTLSHNPEIDHGTLFAEHTNFARQHEDPVRAQ 388
G +EA ++AA DP AA+N L L + P++ + H + P A
Sbjct: 226 GRAAEAVACWQAAWSMDPSLGEAASNALNGLHYLPDLTGDEVGRVHRRMMERDGSPPPAP 285
Query: 389 WPRHVNKRSPDRKLKIGLVSGDLFRHAVASYLLPIMEHLAKDPNLSLHVYNNHIAEDDYT 448
H N P R +++G VS D RH + + P+++ + ++ Y D+ T
Sbjct: 286 ---HANAADPGRVIRVGYVSADFRRHPLGQLMRPVLKGHDRSQVFAV-CYATRPGHDEIT 341
Query: 449 QLLRNCADEWHQITGMPDAQLANKIRDERIDILFDLSGHTGRNRLLTFARKPAPIQVTWM 508
LR+ AD W ++ G+ D LA ++R + IDIL DL G T NRL FA +PAP+Q++W+
Sbjct: 342 AELRHHADLWREVAGLDDGALAQQVRQDGIDILVDLDGQTAGNRLGLFALRPAPVQMSWL 401
Query: 509 GYPGTTGLSAMDYYLADKYGVPFGPAENQFSEKIVHLPSSATFLPEQSAPPVNILPAMHN 568
GYP TTGL+AMDY L D+ VP AE FSE ++ LP S P P++
Sbjct: 402 GYPFTTGLAAMDYALLDRATVP-PEAEAWFSETVLLLPGSRLCYQGPETPEPAPPPSLER 460
Query: 569 GYVTFGSFNRLNKLRRDVIALWAELLRAQPTAKMLL--GAIATDEDEQLLIDWFAGEGIE 626
G VTFGSFN + KL VIA WA +L P +++ L +A DE L FA G++
Sbjct: 461 GSVTFGSFNNIAKLNEQVIAAWARILNRVPNSRLWLKWPHLALDEVASPLRQAFAAHGVD 520
Query: 627 RERLMFRRRSSIPVYLQQHFHVDICLDTFPYTGSTTVLNSLWMGVPTLTIAGDTLASRAG 686
RL R S L ++ +DI LD FPY G+ T +LWMGVP +T+ G SR
Sbjct: 521 PGRLELRGNSPPAQLLAEYAEIDIALDPFPYCGAFTSCEALWMGVPVVTLPGPRPFSRQT 580
Query: 687 TTWMSHVGLDDFVV-ANKEEFVARGVALASDLPALADIRTGLRERCAASAAFRPEVVAAG 745
++ +GL+D + + + VALA+D L +R GLR E AG
Sbjct: 581 LALLAAMGLEDELARPDLAAYEDLAVALAADPERLTRLRGGLRPLMRQGIG-DAEAHVAG 639
Query: 746 VSRALRIMWQRWCA 759
+ R R +W WCA
Sbjct: 640 LERVFRQVWTDWCA 653
Score = 52.8 bits (125), Expect = 6e-11
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 19 LEQDIALVLQTALDHHHKGEFEDAHALYRAIL---DANPKHADVLYNLGVLLGQTARTAE 75
+ D AL+LQ A H++G ++A ALY +L +P+ A L NLGV+ RT E
Sbjct: 1 MTSDPALLLQQAEALHNQGRVDEAEALYHRVLRQAPQSPEAAKSLTNLGVIAHGRGRTGE 60
Query: 76 ALPLFEQCLGLHPHNGQYWAAYISALIDAGETAAA 110
AL L Q L L P + W L D G A
Sbjct: 61 ALTLHGQALALAPQLAEAWCNRGDLLSDLGRLEEA 95
Score = 42.4 bits (98), Expect = 8e-08
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 254 ADTLRLKGLPAETEQECRKILAINPDYAEAQRIF---GMSLVHQGRVAEGLAAARRAIEL 310
A+ L +G E E ++L P EA + G+ +GR E L +A+ L
Sbjct: 12 AEALHNQGRVDEAEALYHRVLRQAPQSPEAAKSLTNLGVIAHGRGRTGEALTLHGQALAL 71
Query: 311 APNNSTAYSTLGVLLLDLGFVSEAEKEFRAALEKDP 346
AP + A+ G LL DLG + EAE +F A + P
Sbjct: 72 APQLAEAWCNRGDLLSDLGRLEEAEGDFVRACDLSP 107
Score = 35.8 bits (81), Expect = 8e-06
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Query: 37 GEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPLFEQCLGLHPHNGQYWAA 96
G A RA + NP HA YNLG + R AEA+ ++ + P G+ +
Sbjct: 192 GRLHAAQNSLRAAISLNPSHAAAHYNLGNVFYGEGRAAEAVACWQAAWSMDPSLGEAASN 251
Query: 97 YISA---LIDAGETAAAWLALEMGQKQGLKGPAVDGLIVRMANPGKVIHTLPVAA 148
++ L D + M ++ G PA A+PG+VI V+A
Sbjct: 252 ALNGLHYLPDLTGDEVGRVHRRMMERDGSPPPAPH---ANAADPGRVIRVGYVSA 303
Score = 29.6 bits (65), Expect = 6e-04
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 37 GEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPLFEQCLGLHPHNGQYWAA 96
G E+A + D +P +NLG + + TA+A P + + L PH A
Sbjct: 90 GRLEEAEGDFVRACDLSPALLPAWFNLGNVRLRRGDTAQAEPCYRRAAALAPHLPLIHAQ 149
Query: 97 YISALIDAGETAAAWLALE 115
L G+ A A+E
Sbjct: 150 LARCLDAMGQAEGAADAME 168