Pairwise Alignments

Query, 790 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score =  229 bits (584), Expect = 4e-64
 Identities = 213/793 (26%), Positives = 333/793 (41%), Gaps = 69/793 (8%)

Query: 34  HHKGEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPLFEQCLGLHPHNGQY 93
           H  G F  A  LY AIL A+P+H + LY  GVLL QT R  ++L    +   L P +G+ 
Sbjct: 13  HRSGNFAVAEPLYGAILAASPEHVEALYAYGVLLAQTGRLPQSLDHLSRAARLAPEDGRI 72

Query: 94  WAAYISALIDAGETAAAWLALEMGQKQGLKGPAVD---GLIVRMANPGKVIHT------- 143
              +   L  AG    +    E G+ +  +    +   GL + ++  G+           
Sbjct: 73  GRNFALVLQAAGRLPES--EREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAISHFQEG 130

Query: 144 LPVAAQKPQAEP------AAATETPPAAESTRTTIASGRRVSQQETNRYTALYNKGNVVE 197
           L +A+Q  +A         AA     A ++          +++   N   AL+  G   +
Sbjct: 131 LALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWAD 190

Query: 198 AVKLARSLTQRFPADGNSWRWLGIALHRLGRYDEALAPLRKAAELFPEELESRTVLADTL 257
           AV          P        +G+AL +LGR +EA    R+A EL P        L   L
Sbjct: 191 AVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRAL 250

Query: 258 RLKGLPAETEQECRKILAINPDYAEAQRIFGMSLVHQGRVAEGLAAARRAIELAPNNSTA 317
           +  G   +  +   K++A+ PD+A A    G+     G+  + +A+  R +EL P N  A
Sbjct: 251 QDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPA 310

Query: 318 YSTLGVLLLDLGFVSEAEKEFRAALEKDPKDHIAANNFL--------------------- 356
           +   G  L + G V +A   FR+AL   P D  A    +                     
Sbjct: 311 WLNRGKALYEAGRVEDALDSFRSALRLMPDDADALCELVNLRKVICDWDGLEAEEALCRR 370

Query: 357 --------------FTLSHNPEIDH--GTLFAEHTNFARQHEDPVRAQWPRHVNKRSPDR 400
                          ++   P      GTL+ +     R H        PR V+      
Sbjct: 371 QVADGKAGIDPQVFMSIPATPAEQRRCGTLWGKMITEDRAHAVHGLDLAPRAVSPAGS-- 428

Query: 401 KLKIGLVSGDLFRHAVASYLLPIMEHLAKDPNLSLHVYNNHIAED-DYTQLLRNCADEWH 459
           K+++G +S D   H VA  +  + E   +     +  Y+    +D D  + L    D + 
Sbjct: 429 KIRLGYISADFRTHPVAHLMAGVFERHDRS-RFEVSAYSIGPYQDSDMRRRLEAAFDRFV 487

Query: 460 QITGMPDAQLANKIRDERIDILFDLSGHTGRNRLLTFARKPAPIQVTWMGYPGTTGLSAM 519
            +  +  A+ A +I  + IDIL DL+G+T   R    A +PAPIQV ++G+  T G++ M
Sbjct: 488 DLEAVGSAEAARRIHGDGIDILVDLTGYTKHCRPEILACRPAPIQVNFLGFTATMGVNWM 547

Query: 520 DYYLADKYGVPFGPAENQFSEKIVHLPSSATFLPEQSAPPVNILPAMHNGY------VTF 573
           DY L D +  P    ++ F+E +VH+P    +LP     PV       + Y        +
Sbjct: 548 DYILTDAFVAPQA-RQDGFAEALVHMPHC--YLPFGDLAPVGEPVQPRSAYGLPEDAFVY 604

Query: 574 GSFNRLNKLRRDVIALWAELLRAQPTAKMLLGAIATDEDEQLLIDWFAGEGIERERLMFR 633
             FN   K R +V  LWA++LRA P   + L     D     L    A  GI+  RL+F 
Sbjct: 605 CGFNNPFKFRAEVFDLWADILRAVPQGVLWLRE-DNDYSRNNLGREIAARGIDPARLIFA 663

Query: 634 RRSSIPVYLQQHFHVDICLDTFPYTGSTTVLNSLWMGVPTLTIAGDTLASRAGTTWMSHV 693
           +R+    ++ +H   D+ LD  PY   TT  ++LW G+P LT  G+T ASR   + +S +
Sbjct: 664 QRTDFAEHMARHRLADLFLDCLPYNAHTTASDALWAGLPVLTRVGETFASRVAGSLLSGL 723

Query: 694 GLDDFVVANKEEFVARGVALASDLPALADIRTGLRERCAASAAFRPEVVAAGVSRALRIM 753
           GL + +  + EE+  R +ALAS    L  ++  L      +  F+ EV    +  A   M
Sbjct: 724 GLPELITESAEEYRERAIALASRPEELRALKDRLEVNRLTAPQFKSEVFTRDLEAAFLRM 783

Query: 754 WQRWCAGEPAAAF 766
            +R  AG    AF
Sbjct: 784 AERSRAGLAPEAF 796



 Score = 54.7 bits (130), Expect = 2e-11
 Identities = 46/169 (27%), Positives = 73/169 (43%)

Query: 178 VSQQETNRYTALYNKGNVVEAVKLARSLTQRFPADGNSWRWLGIALHRLGRYDEALAPLR 237
           + Q+   R  A +  GN   A  L  ++    P    +    G+ L + GR  ++L  L 
Sbjct: 1   MDQETFARAQAEHRSGNFAVAEPLYGAILAASPEHVEALYAYGVLLAQTGRLPQSLDHLS 60

Query: 238 KAAELFPEELESRTVLADTLRLKGLPAETEQECRKILAINPDYAEAQRIFGMSLVHQGRV 297
           +AA L PE+       A  L+  G   E+E+E  ++    PD AE +   G+ +  QGR 
Sbjct: 61  RAARLAPEDGRIGRNFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRF 120

Query: 298 AEGLAAARRAIELAPNNSTAYSTLGVLLLDLGFVSEAEKEFRAALEKDP 346
            E ++  +  + LA  +  A   LG+     G + EA   F  A E  P
Sbjct: 121 DEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAP 169