Pairwise Alignments

Query, 790 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 714 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score = 81.3 bits (199), Expect = 2e-19
 Identities = 96/343 (27%), Positives = 132/343 (38%), Gaps = 25/343 (7%)

Query: 18  QLEQDIALVLQTALDHHHKGEFEDAHALYRAILDANPKH----ADVLYNLGVLLGQTART 73
           QL   I  + Q A+     G+F +A ++   ++D +       AD L   G       R 
Sbjct: 5   QLASPIDDINQRAVSSFSAGQFAEALSMVTPLVDGDAMPDGALADALNIAGACSFALQRP 64

Query: 74  AEALPLFEQCLGLHPHNGQYWAAYISALIDAGETAAAWLALEMGQKQGLKGPAVDGLIVR 133
           AEA   + +CL L P     + +    L   G  +AA            K      + +R
Sbjct: 65  AEAERYWRRCLQLRPDYADVYGSLGMLLKSLGRLSAA------------KAMYRQLVALR 112

Query: 134 MANPGKVIHTLPVAAQKPQAEPAAATETPPAAESTRTTIASGRRVSQQETNRYTALYNKG 193
             +P    H   V       E A A        S R  +A     ++   NR   L+   
Sbjct: 113 PGDPDARNHLGAVLYGLGYKEEAEA--------SYRQALAIRPDYAEAHYNRGIVLHELR 164

Query: 194 NVVEAVKLARSLTQRFPADGNSWRWLGIALHRLGRYDEALAPLRKAAELFPEELESRTVL 253
              EA    R      PA       LG  L  LGR  EA A  R+A  + P+  E+   L
Sbjct: 165 RPQEAEAAFRDALPGLPAHAEVHNNLGNVLMELGRLAEADAAYREALTIRPQYPEALNNL 224

Query: 254 ADTLRLKGLPAETEQECRKILAINPDYAEAQRIFGMSLVHQGRVAEGLAAARRAIELAPN 313
              L+      E E   R  LAI PDYAEA    G  L    R+ E  AA R AI   P+
Sbjct: 225 GGVLKATFRHTEAELAFRLALAIRPDYAEALLNLGTVLADFERLPEAEAAYRDAIAQRPD 284

Query: 314 NSTAYSTLGVLLLDLGFVSEAEKEFRAALEKDPKDHIAANNFL 356
            + A+  LGV L  +  + EAE  +R A+   P D + A+N L
Sbjct: 285 YAEAHYNLGVTLCKMEHLFEAEAAYREAIRLRP-DLVHAHNNL 326



 Score = 72.4 bits (176), Expect = 8e-17
 Identities = 87/312 (27%), Positives = 123/312 (39%), Gaps = 40/312 (12%)

Query: 41  DAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPLFEQCLGLHPHNGQYWAAYISA 100
           +A   +R  L   P +ADV  +LG+LL    R + A  ++ Q + L P +          
Sbjct: 66  EAERYWRRCLQLRPDYADVYGSLGMLLKSLGRLSAAKAMYRQLVALRPGDP--------- 116

Query: 101 LIDAGETAAAWLALEMGQKQGLKGPAVDGLIVRMA------NPGKVIHTLPVAAQKPQAE 154
             DA     A L   +G K+  +      L +R        N G V+H L    ++PQ  
Sbjct: 117 --DARNHLGAVL-YGLGYKEEAEASYRQALAIRPDYAEAHYNRGIVLHEL----RRPQEA 169

Query: 155 PAAATETPPAAESTRTTIASGRRVSQQETNRYTALYNKGNVVEAVKLARSLTQRFPADGN 214
            AA  +  P   +           ++   N    L   G + EA    R      P    
Sbjct: 170 EAAFRDALPGLPAH----------AEVHNNLGNVLMELGRLAEADAAYREALTIRPQYPE 219

Query: 215 SWRWLGIALHRLGRYDEALAPLRKAAELFPEELESR----TVLADTLRLKGLPAETEQEC 270
           +   LG  L    R+ EA    R A  + P+  E+     TVLAD  RL     E E   
Sbjct: 220 ALNNLGGVLKATFRHTEAELAFRLALAIRPDYAEALLNLGTVLADFERLP----EAEAAY 275

Query: 271 RKILAINPDYAEAQRIFGMSLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGVLLLDLGF 330
           R  +A  PDYAEA    G++L     + E  AA R AI L P+   A++ LG +L  L  
Sbjct: 276 RDAIAQRPDYAEAHYNLGVTLCKMEHLFEAEAAYREAIRLRPDLVHAHNNLGCVLRRLDR 335

Query: 331 VSEAEKEFRAAL 342
           +  A   F  AL
Sbjct: 336 LPAAVDAFEQAL 347



 Score = 60.8 bits (146), Expect = 2e-13
 Identities = 48/140 (34%), Positives = 60/140 (42%)

Query: 220 GIALHRLGRYDEALAPLRKAAELFPEELESRTVLADTLRLKGLPAETEQECRKILAINPD 279
           GI LH L R  EA A  R A    P   E    L + L   G  AE +   R+ L I P 
Sbjct: 157 GIVLHELRRPQEAEAAFRDALPGLPAHAEVHNNLGNVLMELGRLAEADAAYREALTIRPQ 216

Query: 280 YAEAQRIFGMSLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGVLLLDLGFVSEAEKEFR 339
           Y EA    G  L    R  E   A R A+ + P+ + A   LG +L D   + EAE  +R
Sbjct: 217 YPEALNNLGGVLKATFRHTEAELAFRLALAIRPDYAEALLNLGTVLADFERLPEAEAAYR 276

Query: 340 AALEKDPKDHIAANNFLFTL 359
            A+ + P    A  N   TL
Sbjct: 277 DAIAQRPDYAEAHYNLGVTL 296



 Score = 60.5 bits (145), Expect = 3e-13
 Identities = 78/301 (25%), Positives = 118/301 (39%), Gaps = 28/301 (9%)

Query: 37  GEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPLFEQCLGLHPHNGQYWAA 96
           G  E+A A YR  L   P +A+  YN G++L +  R  EA   F   L   P + +    
Sbjct: 130 GYKEEAEASYRQALAIRPDYAEAHYNRGIVLHELRRPQEAEAAFRDALPGLPAHAEVHNN 189

Query: 97  YISALIDAGETAAAWLALEMGQKQGLKGPAVDGLIVRMANPGKVIH---TLPVAAQKPQA 153
             + L++ G  A A  A              + L +R   P  + +    L    +  +A
Sbjct: 190 LGNVLMELGRLAEADAAYR------------EALTIRPQYPEALNNLGGVLKATFRHTEA 237

Query: 154 EPAAATETPPAAESTRTTIASGRRVSQQETNRYTALYNKGNVVEAVKLARSLTQRFPADG 213
           E A            R  +A     ++   N  T L +   + EA    R    + P   
Sbjct: 238 ELAF-----------RLALAIRPDYAEALLNLGTVLADFERLPEAEAAYRDAIAQRPDYA 286

Query: 214 NSWRWLGIALHRLGRYDEALAPLRKAAELFPEELESRTVLADTLR-LKGLPAETEQECRK 272
            +   LG+ L ++    EA A  R+A  L P+ + +   L   LR L  LPA  +    +
Sbjct: 287 EAHYNLGVTLCKMEHLFEAEAAYREAIRLRPDLVHAHNNLGCVLRRLDRLPAAVDA-FEQ 345

Query: 273 ILAINPDYAEAQRIFGMSLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGVLLLDLGFVS 332
            L + PD AEA    G +     +  E  +A RRA+ L  +   A   L VLLL +G   
Sbjct: 346 ALGVCPDMAEAHYNLGAARAQLMQFPEAESAYRRALALRADYGDAKFGLSVLLLGMGRFE 405

Query: 333 E 333
           E
Sbjct: 406 E 406



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 20  EQDIALVLQTALDHHHKG-------EFEDAHALYRAILDANPKHADVLYNLGVLLGQTAR 72
           EQ + +    A  H++ G       +F +A + YR  L     + D  + L VLL    R
Sbjct: 344 EQALGVCPDMAEAHYNLGAARAQLMQFPEAESAYRRALALRADYGDAKFGLSVLLLGMGR 403

Query: 73  TAEALPLFE 81
             E   L+E
Sbjct: 404 FEEGWRLYE 412