Pairwise Alignments

Query, 790 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 681 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  152 bits (384), Expect = 6e-41
 Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 22/383 (5%)

Query: 384 PVRAQWPRHVNKRSPD--RKLKIGLVSGDLFRHAVASYLLPIMEHLAKDPNLSLHVYNNH 441
           P  +++PR   K+     ++L++G +S DL  HAV   L  ++E   KD       Y  +
Sbjct: 240 PDLSRFPRRSPKQKSGTGQRLRVGYLSSDLRDHAVGFALCEVLELHDKDSLEVFAYYCGN 299

Query: 442 IAEDDYTQ-LLRNCADEWHQITGMPDAQLANKIRDERIDILFDLSGHTGRNRLLTFARKP 500
           +   D TQ  ++     W  I G+ DA  A++I  + IDIL D++G+T   R   FA +P
Sbjct: 300 VRGTDSTQERIKAAVHCWRDIHGVDDATAASQIIADEIDILIDVNGYTKDARAKIFAYRP 359

Query: 501 APIQVTWMGYPGTTGLSAMDYYLADKYGVPFGPAENQ--FSEKIVHLPSSATFLPEQSAP 558
           AP+ V++ GYPG+ G     Y ++D Y +P    EN+  +SEK++ +   A   P     
Sbjct: 360 APVIVSFCGYPGSMGSPFHQYLISDGYMIP---PENEIYYSEKVLRI---ACDQPLDRKR 413

Query: 559 PVNILPA-----MHNGYVTFGSFNRLNKLRRDVIALWAELLRAQPTAKMLLGAIATDED- 612
           PV   P+     +      + SFN + K+  +  A W  +L   P +  LL  +  D+D 
Sbjct: 414 PVAARPSRADVGLPEDAFVYASFNGMQKITENCFARWMTILSETPGS--LLWLLTGDDDV 471

Query: 613 EQLLIDWFAGEGIERERLMFRRRSSIPVYLQQHFHVDICLDTFPYTGSTTVLNSLWMGVP 672
            Q L D     G+  ERL+F  ++  P ++ +    D+ LDTFPY   +T  +++  G+P
Sbjct: 472 NQRLRDLAEKSGVASERLVFAPKAQNPQHIARIGLADLFLDTFPYGAHSTASDAITSGLP 531

Query: 673 TLTIAGDTLASRAGTTWMSHVGLDDFVVANKEEFVARGVALASDLPALADIRTGLRERCA 732
            LT+ G T A+R   + ++  G+ + + ++ E++VAR +    D  +L ++R  +  +  
Sbjct: 532 VLTMYGKTFAARFCGSIVTAAGVPEMICSSPEDYVARAIGFERDRQSLLEVRESIARQRE 591

Query: 733 ASAAFRPEVVAAGVSRALRIMWQ 755
            S       + A   R   + WQ
Sbjct: 592 TSVL---RDIPALARRLEELFWQ 611



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 5/101 (4%)

Query: 8   PPAEPLTPEQQLEQDIALVLQTALDHHHKGEFEDAHALYR---AILDANPKHADVLYNLG 64
           P A  L   Q+L     L +  AL+    G+   A  LY+   A  D NP      +N  
Sbjct: 15  PSALDLARNQRLSLMDLLSVSEALNA--AGQQAAAAELYKTWVAFNDNNPTIHLAYFNYA 72

Query: 65  VLLGQTARTAEALPLFEQCLGLHPHNGQYWAAYISALIDAG 105
           V+L Q    A A+  F  CL  +P           AL DAG
Sbjct: 73  VMLNQLGDRAGAVQAFRACLKANPEFAPGHINLGRALEDAG 113