Pairwise Alignments

Query, 286 a.a., flagellar motor protein MotA from Burkholderia phytofirmans PsJN

Subject, 283 a.a., Motility protein A from Pseudomonas sp. DMC3

 Score =  242 bits (617), Expect = 8e-69
 Identities = 125/282 (44%), Positives = 180/282 (63%), Gaps = 2/282 (0%)

Query: 1   MLIFVGTLVTLLSVFGGYALEGGHLGALLQPVEVLMIVGAGVGAFILGNGMKTIKATLRV 60
           M   +G +V   SV GGY L  G + AL+QP EV++I GA +GAF+  N        L+ 
Sbjct: 1   MAKIIGIIVVFASVLGGYVLSHGKIAALIQPFEVMIIGGAALGAFLQANPGYMTMHVLKK 60

Query: 61  IPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILADH 120
             ++F G+++    Y+E++ L+Y +L K+R+EG + +E DI+D + SPIF +YP +L D 
Sbjct: 61  SLSMF-GSRFTHTFYLEVLGLIYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAVLKDE 119

Query: 121 HIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALNKVGDAMPAFGIVAA 180
            +  F+ DYLR+M  GNM   E+E L D E+ +  ++ E P+HA+N + D MP FGIVAA
Sbjct: 120 RMTAFVCDYLRIMSSGNMAPHELEGLFDMELYSLKEDLEHPSHAVNGIADGMPGFGIVAA 179

Query: 181 VMGVVHTMAS-ADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMFQ 239
           V+G+V TMAS  +   A +G  +  ALVGTF GIL +YG  GPLA        E   +++
Sbjct: 180 VLGIVVTMASLGEGDQASIGLHVGAALVGTFFGILAAYGFFGPLAHSLAHDAKEELNVYE 239

Query: 240 CIKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVR 281
            IK +++AS +G  P++AVEFGRKVL+   RPSFAELE+ VR
Sbjct: 240 AIKASLVASASGMPPSLAVEFGRKVLYPAHRPSFAELEQAVR 281