Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 314 a.a., motility protein MotB from Ralstonia solanacearum UW163

 Score =  270 bits (691), Expect = 3e-77
 Identities = 154/322 (47%), Positives = 198/322 (61%), Gaps = 35/322 (10%)

Query: 9   IVVKRAAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFNQPLKI 68
           IV++R      GHHGGAWK+AYADF+TAMMAFFLLMWLLSS +  +L  +  YF  PLK+
Sbjct: 10  IVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETYFRTPLKV 69

Query: 69  TLWGGDRSAEDSSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQLQGELE 128
            L+GG  S + SSIL+G              S     N  + + +     ++++ +   +
Sbjct: 70  ALFGGAGSGDQSSILQG--------------SPAIKQNMPQPNPS--PSPTVQRQRNIRD 113

Query: 129 RREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQV 188
             +   L+ L+  +M  IE+NPV+ QFK Q+ ID T  GLRI+IVD Q RPMFA A  +V
Sbjct: 114 ESDDAALNKLKQHIMEMIESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEV 173

Query: 189 EPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIGG 248
           +PYMR ILRE+G  LNDVPN I + GHTDA QYA  + GYSNWELSADRANASRRELI G
Sbjct: 174 QPYMRTILRELGAALNDVPNPISLSGHTDATQYA-TQNGYSNWELSADRANASRRELIAG 232

Query: 249 GMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSEEALNHDDSTTT------- 301
           GM   KV RV+GL ++  L+K D  +P NRRISI+VLN ++  A+       T       
Sbjct: 233 GMKPEKVARVVGLEASVPLDKTDAFNPINRRISIVVLNNRTANAVRAGGIEPTADLRNDG 292

Query: 302 --TLSD---------DAAGSKP 312
             TL+D         DA G+KP
Sbjct: 293 KDTLTDAAARATGVADAVGAKP 314