Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

 Score =  218 bits (554), Expect = 2e-61
 Identities = 127/327 (38%), Positives = 188/327 (57%), Gaps = 25/327 (7%)

Query: 4   DKDRAIVVKRAAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFN 63
           + ++ I+VKR      GHHGGAWK+A+ADF TAMMAFFL++WLLS+A+  Q   IA YF 
Sbjct: 2   ENNQPIIVKRIKRFGDGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFK 61

Query: 64  QPLKITLWGGDRSAEDSSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQL 123
            P+     G   S     I  GG   ++ +    T + E  +     ++    +D ++ +
Sbjct: 62  DPI-----GFSESGTPYIIDLGGSPQLAPEK---TINPEVKSEPTPDTSLQLDQDKVESM 113

Query: 124 QGELERREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFAT 183
             ++ER    RL  L  +L   +E NP L++FK QI  + T  GLRI+I+D++ RPMF  
Sbjct: 114 AEQVERE---RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDL 170

Query: 184 AKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRR 243
              +++PY  DIL  +  T+  VPN+I + GHTDA  YA G   + NWELSA+RANA+RR
Sbjct: 171 GSARLQPYFEDILLAMADTIKAVPNKISISGHTDAKPYA-GTGDFGNWELSANRANAARR 229

Query: 244 ELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSEEALNHDDSTTTTL 303
            L+ GG  + +V RV+G AS+   ++ +P++P NRRI IIVL +K++  +  +       
Sbjct: 230 ALVAGGYPDTQVARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKKAQRTIEGEQ------ 283

Query: 304 SDDAAGSKPLLQKLAQPVTVAPKLPAA 330
                 ++P     AQP   AP +PAA
Sbjct: 284 ------TQPAAPDAAQPGAAAP-VPAA 303