Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 346 a.a., Motility protein B from Pseudomonas sp. RS175

 Score =  210 bits (535), Expect = 4e-59
 Identities = 118/290 (40%), Positives = 175/290 (60%), Gaps = 13/290 (4%)

Query: 4   DKDRAIVVKRAAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFN 63
           + ++ I+VKR      GHHGGAWK+A+ADF TAMMAFFL++WLLS+A+  Q   IA YF 
Sbjct: 2   ENNQPIIVKRVKRIAGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFK 61

Query: 64  QPLKITLWGGDRSAEDSSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQL 123
            P+     G   S     I  GG   ++ +    T + E  +      A   + ++    
Sbjct: 62  DPV-----GFSESGTPYIIDLGGSPVLAPEN---TLNPEVKSQPQPDKATVDANEA---- 109

Query: 124 QGELERREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFAT 183
           +G  E+ E+ RL  L  +L   +E NP L++FK QI  + T  GLRI+I+D++ RPMF +
Sbjct: 110 EGMAEQVERERLELLLQELQNKVEENPELQKFKDQILFEITPNGLRIQIMDAENRPMFDS 169

Query: 184 AKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRR 243
              +++PY  DIL  +  T+  VPN+I + GHTDA  Y  G+  + NWELSA+RANA+RR
Sbjct: 170 GSARLKPYFEDILLAMADTIKAVPNKISISGHTDAKPYI-GKGDFGNWELSANRANAARR 228

Query: 244 ELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSEEAL 293
            L+ G   + +V RV+G AS+   ++ DP +P NRRI I+VL +K+++A+
Sbjct: 229 ALVAGSYPDEQVARVVGYASSALFDRKDPFNPVNRRIDIVVLTKKAQKAI 278