Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 357 a.a., Flagellar motor rotation protein MotB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  284 bits (726), Expect = 3e-81
 Identities = 164/334 (49%), Positives = 208/334 (62%), Gaps = 23/334 (6%)

Query: 5   KDRAIVVKRAAPKKAGH--HGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYF 62
           K + I++KR   KK GH  HGGAWK+AYADF+TAMMAFFLLMWLL S +  +L+GIA YF
Sbjct: 7   KLQPIIIKRI--KKGGHAAHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIASYF 64

Query: 63  NQPLKITLWGGDRSAEDSSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQ 122
             P+K++L GG  +   SSIL GGGRD+S    G   S E         A     DS+  
Sbjct: 65  QSPVKVSLMGGPGTGNSSSILPGGGRDLSKSF-GQMDSGEAERAAKLIGAQMARADSM-- 121

Query: 123 LQGELERREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFA 182
                 RR+  R+  L+ K+   IE NP L +F  QI+++ TL GL I+IVD Q RPMF 
Sbjct: 122 ------RRDAARIDALERKITTLIEKNPKLSEFGSQIQLEKTLDGLHIQIVDQQNRPMFD 175

Query: 183 TAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASR 242
           T    V+PYMRDILREIG  L DV NRI + GHTDA  Y  GE+GYSNWELSADRANASR
Sbjct: 176 TGSALVKPYMRDILREIGAALGDVENRIALAGHTDATPYGSGERGYSNWELSADRANASR 235

Query: 243 RELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSEEALNHDDSTTTT 302
           REL+ GG+ + K+ RV GLAS++ L +  P DP NRRISI+V+ +++E+ L    S    
Sbjct: 236 RELVAGGLPQDKLRRVEGLASSRLLREDLPTDPINRRISIVVMTQEAEDRLLPRSSPRPV 295

Query: 303 LSDDAAGSKPLLQKLAQPV--TVAPKLPAAVSSA 334
           +        P+L+    PV    A + PAA  +A
Sbjct: 296 M--------PMLEPAPPPVPTAAATRAPAARPAA 321