Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 341 a.a., Motility protein B from Azospirillum sp. SherDot2

 Score =  164 bits (414), Expect = 4e-45
 Identities = 114/330 (34%), Positives = 157/330 (47%), Gaps = 53/330 (16%)

Query: 9   IVVKR--AAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFNQPL 66
           I+VKR   +      H G WKLAYADF+TAMM FFL+MWL++  +T Q KGIADYFN P+
Sbjct: 10  IIVKRHLGSHHDEEEHNGTWKLAYADFVTAMMTFFLVMWLMNITTTEQRKGIADYFN-PV 68

Query: 67  KITLW--GGDRSAEDSSILKGG--------GRDISTDAQGVTRSSEGSNNRAEH------ 110
            ++    G D      S+ K G        G   S  A     +S G ++R         
Sbjct: 69  AVSQSNSGADGMLAGRSVDKSGSLTTPNAAGDQASPVASPPVVASVGDSDRQPAGRRDPM 128

Query: 111 ------------------------SAAHGSEDSIKQLQGELER---------REQVRLHD 137
                                   SA      +++  + ELE           E+  L  
Sbjct: 129 PHPPGGTVPPVDLLRPATESAPAASATEAPAPTVQATRAELEALLDRQSSELTEKAALES 188

Query: 138 LQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFATAKDQVEPYMRDILR 197
           L+  L   I A+P L   +  + I     GLR+++ D  +  MF     Q+    R ++R
Sbjct: 189 LERDLRQRIAASPDLSALQASLVIQQVPEGLRVQLTDQARFSMFKVGSAQMNDQGRRLMR 248

Query: 198 EIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRRELIGGGMDEAKVMR 257
            +   L  VPN I + GHTDA  YA   K Y NWELS+DRANA+RREL+  G+   +++R
Sbjct: 249 MVAAALASVPNPIGITGHTDALGYAPDAK-YGNWELSSDRANAARRELLASGIPGGRIVR 307

Query: 258 VLGLASTQNLNKADPMDPENRRISIIVLNR 287
           V G A   +   +DP+DP NRRISI +L R
Sbjct: 308 VEGRADLDHFGASDPLDPSNRRISITLLRR 337