Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 378 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  159 bits (401), Expect = 1e-43
 Identities = 111/354 (31%), Positives = 167/354 (47%), Gaps = 81/354 (22%)

Query: 6   DRAIVVKRAAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFNQP 65
           +R I++K+      GHHGGAWK+AYADF+TAMMAFFLL+WLL+  ++ Q KGIADYF+ P
Sbjct: 9   ERPIIIKKKKGGHGGHHGGAWKVAYADFVTAMMAFFLLLWLLNVTTSDQRKGIADYFS-P 67

Query: 66  LKITLWGGDRSAEDSSILKGG------GRDIS----------------------TDAQGV 97
           + ++     R    S  + GG      G  +S                       DA   
Sbjct: 68  VSVS-----REQSGSGGMLGGKTITVPGAQVSPSSPMSADVPVSGPPGYSAQQTEDADDP 122

Query: 98  TRSS----EGSNNRAEHSAAHGSEDSIKQLQGELERREQVRLHDLQVKL----------- 142
           T S+    +G+      S A    D   Q   E     Q R+ ++  +L           
Sbjct: 123 TESTSGPGQGTGPGKSASGAAPDADVADQKPNETRAEFQKRMEEMAKQLGIPGQKPGEKL 182

Query: 143 ----------MAAIE-ANPVLRQFKQ--------------------QIRIDSTLTGLRIE 171
                     M +++ A    RQF+Q                     + ID T  GLRI+
Sbjct: 183 SDFGERVKEAMDSLQGAAKEARQFQQAATEIRQAIQSVPELEPLAQNLMIDQTPEGLRIQ 242

Query: 172 IVDSQKRPMFATAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNW 231
           IVD  +  MF     Q+ P  R +++++   L+ +PN++ + GHTD++ +  G  G  NW
Sbjct: 243 IVDQDRVSMFPGGSGQMYPQTRQLVQQVAKALSKLPNKLSISGHTDSSPFPAG-SGRDNW 301

Query: 232 ELSADRANASRRELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVL 285
           +LS +RANA+RR L+ GG+D  ++  V+G A    L    P  P NRRI++++L
Sbjct: 302 DLSTERANATRRALLAGGIDPTRIQDVVGKADRDPLVADQPNSPRNRRIAMVLL 355