Pairwise Alignments

Query, 497 a.a., flagellar hook-length control protein from Burkholderia phytofirmans PsJN

Subject, 421 a.a., Flagellar hook-length control protein FliK from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 9e-24
 Identities = 111/432 (25%), Positives = 166/432 (38%), Gaps = 31/432 (7%)

Query: 77  PADPAPKSADDASSKDTSKPTNSASSTAPS-GDTQQA--------STDKTNAAPAKTSNT 127
           P  P P    +A +K +   T  A     + GD   A          DK      K +  
Sbjct: 2   PVAPNPLLQANAIAKTSRSATVQADKPLQALGDKGDAFGQVMARQGRDKVTGQDDKVAQ- 60

Query: 128 ASQTDAGTAAAAAAAQAQAQAQAQADANNANTPTTADPATALTDAATALPGTATDATTNG 187
           A   D   AAA        +A    D N      +A   T + DA+  + G  TDA    
Sbjct: 61  AKPKDKPDAAAGGKKDPAGKAAVADDGNKLPEEDSAQADTGVRDASL-VAGQVTDAQ--- 116

Query: 188 TPGKKTAATDPKSLQDALQAALAALANGQGVPAQALASGAAANAATSANGLNGTNAGLNG 247
            PG +      +++   LQAA A       +P +  A  A    A     L      L  
Sbjct: 117 -PGAQLIQAQAEAVAPVLQAATAQTQVSAALPEEPSAEEAFDPDADPLANLPTLRLALEH 175

Query: 248 TADGK--TLGAGLFGDGKGSSASKAAMTTAATTVADPSAASKAAADALTATAAGGTQADG 305
           +A  K  T    L          +AA+ T A  V D    S  +       A G    DG
Sbjct: 176 SAQAKGGTSAHALDAAQAQGEEGQAAVNTLANLVEDTDGESAESG----GKAFGALLEDG 231

Query: 306 LASFKSAADAATAALAASQAAASAASTTAAVQTTGNASAAEAANTLSP-QVGTTDWEDAL 364
           L   KSA+        A++ A+    T AA   T NA  A A     P  +    W + L
Sbjct: 232 LKDTKSASSDTRIDDFANRLASL---TQAATAKTANAVPATANPLHQPLPMNQNAWAEGL 288

Query: 365 SQKVVFLSNAHSQSAELTLNPKDLGPLQVVLQVA-DNHAHALFVSQHQSVREAVEAALPK 423
             +V++LS+ + +SA++ L P +LG L + + VA D      F+S H  VR+A+++ + +
Sbjct: 289 VNRVMYLSSQNLKSADIQLEPAELGRLDIRVNVAADQATQVTFISGHAGVRDALDSQVHR 348

Query: 424 LREAMESNGIGLGSASVSDGFARQSSQQQSADSGRSGGRSSGGSGSFGGGSGDAVASTVN 483
           LRE     G+     +V+D    Q  QQ     G++ G +  G  +     G A A    
Sbjct: 349 LRELFAQQGLAQPDVNVADQSRGQQQQQ-----GQAQGSNLSGVAARRAEQGGAEAVDSA 403

Query: 484 VPVRRTVGLVDT 495
            P+ + V + D+
Sbjct: 404 RPLEQQVVVGDS 415



 Score = 32.7 bits (73), Expect = 3e-05
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 45  SAAALSASQQQAAAAASSGTSPSASSVHDAPPPADPAPKSADDASSKDTSKPTNSASSTA 104
           SA AL A+Q Q     ++  +  A+ V D    +  +   A  A  +D  K T SASS  
Sbjct: 184 SAHALDAAQAQGEEGQAA-VNTLANLVEDTDGESAESGGKAFGALLEDGLKDTKSASSDT 242

Query: 105 PSGDTQQASTDKTNAAPAKTSNTASQT 131
              D        T AA AKT+N    T
Sbjct: 243 RIDDFANRLASLTQAATAKTANAVPAT 269