Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 386 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  261 bits (666), Expect = 3e-74
 Identities = 176/405 (43%), Positives = 222/405 (54%), Gaps = 35/405 (8%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRFGL 60
           MKKSLLA A  GAFA  AHAQSSVTLYG+ID G     N  G   + + S   Q + FGL
Sbjct: 1   MKKSLLAAALFGAFAMSAHAQSSVTLYGLIDTGLVYTNNQFGHSNWQMVSSSTQNTVFGL 60

Query: 61  RGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQ-FGTVTLGRQYDSVV 119
           +G+EDLGGGL A+F LE GF +NNG     G  FG QA+VGL S  +GT+T GRQ+D + 
Sbjct: 61  KGSEDLGGGLHAVFKLEQGFLLNNGAQAFSGDGFGSQAWVGLQSDPYGTLTFGRQFDVMN 120

Query: 120 DYVGPLEAG-DQWGGYIAAHPGDIDNF-NNAYRTNNTVKYTSANYGGLTFGGTYSFGGIA 177
           D VGPL A  +  GG +AAHP + DN   N+   NN+VKY S  Y G+TF   YSF   A
Sbjct: 121 DLVGPLTAEFNTSGGSMAAHPFENDNLAANSVVINNSVKYASPTYRGVTFETMYSFSNKA 180

Query: 178 GNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAVTSPIYAGF 237
           G+  +N+ +  G  Y  GP+ L  GYL          L N G+     A AVTS   +  
Sbjct: 181 GDFGNNRSYGFGVSYAQGPVNLAAGYLQ---------LNNAGN----GAGAVTSGDASAN 227

Query: 238 TSANTYQVIGAGGAYTFGAATIGATYSNIRFGN------------LGASYASPFK-GQSA 284
             A   ++   GG YTFG AT+G  +S+ +  N            LG+   S    G S 
Sbjct: 228 FIAQRQRIWSLGGNYTFGPATVGLVWSHAQIDNASGVFSFGTGSYLGSGDTSAGSLGGSL 287

Query: 285 TFNNAELNFKYQLTPALLVGAAYDYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVTG 344
             +N E+N KY LTPAL V  AY YT GA  NG+S   ++   +  DY +SKRTD Y+ G
Sbjct: 288 RLDNYEVNAKYALTPALSVSGAYTYTHGA-YNGSSPG-WNTAMLQTDYSISKRTDFYLEG 345

Query: 345 VYQHALGDTVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
           VYQ+  G    A    V + A IN LS S+   Q    +G+RH F
Sbjct: 346 VYQNVHG----APADSVLSHAMINTLSPSATNTQVAVTVGMRHAF 386