Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 377 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  320 bits (819), Expect = 5e-92
 Identities = 187/397 (47%), Positives = 231/397 (58%), Gaps = 28/397 (7%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRFGL 60
           MKKSL+ +A   +FA VAHAQSSVTLYG++D G    +N      +   SG +  S FGL
Sbjct: 1   MKKSLIVVAVAASFASVAHAQSSVTLYGLLDAGLTYTSNVNHNAKWAAGSGGINQSMFGL 60

Query: 61  RGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSS-QFGTVTLGRQYDSVV 119
           RG+EDLGGGLKAIF LE+GF++NNGK      MF RQA+VGLSS QFGTVTLGRQYD+  
Sbjct: 61  RGSEDLGGGLKAIFTLESGFNINNGKFANNNGMFNRQAFVGLSSAQFGTVTLGRQYDAAQ 120

Query: 120 DYVGPLEAGDQWGGYIAAHPGDIDNF--NNAYRTNNTVKYTSANYGGLTFGGTYSFGGIA 177
           DY+ PL A   WGG   AHP + DN   N  Y  NN+VKY+SANY G TFGGTY F   A
Sbjct: 121 DYLAPLTATGSWGGTYFAHPFNNDNLNTNGGYAVNNSVKYSSANYAGFTFGGTYGFSNQA 180

Query: 178 GNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAVTSPIYAGF 237
           G   +N+ +S+GA Y    L LG  Y     P A       G+T A+  + V +   AG 
Sbjct: 181 GAFANNREYSVGAAYQWQGLHLGAAYAQQNNPGA-------GNTGASDGSYVNA--LAGN 231

Query: 238 TSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNAELNFKYQL 297
                 +  G  G+Y FG AT+G  ++  R  N           QS   NN E+N KY L
Sbjct: 232 VGNFRQREFGVAGSYAFGPATVGLAWTQSRSDNFVGGQ------QSLRANNYEVNGKYNL 285

Query: 298 TPALLVGAAYDYT----RGAEINGNSRA-QYHQGAVGVDYFLSKRTDVYVTGVYQHALGD 352
           TPAL +G AY +T     G   NG S + +YHQ  V  DY LS+RTDVY   VYQHA+GD
Sbjct: 286 TPALGLGVAYTFTDGKGYGVGANGGSESVRYHQIGVQADYSLSRRTDVYAQAVYQHAMGD 345

Query: 353 TVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
                G V    +G N    SS++NQ  A +G+RH+F
Sbjct: 346 -----GGVASIYSGDNTQLPSSSKNQTAATVGLRHRF 377