Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 395 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  514 bits (1325), Expect = e-150
 Identities = 262/396 (66%), Positives = 303/396 (76%), Gaps = 8/396 (2%)

Query: 1   MKKSLL-----ALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQG 55
           MKKS +      +AA  A   + HAQ SVTLYG+IDEGF++ TN  GKH Y L+SGV+QG
Sbjct: 1   MKKSAVLGLGCTIAAACAMPSLVHAQGSVTLYGLIDEGFSMYTNVAGKHQYLLNSGVMQG 60

Query: 56  SRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQFGTVTLGRQY 115
           SR+GL+G EDLGGG K +F LE+GFD + GKL QGGL FGRQAYVGL S +GTVTLGRQY
Sbjct: 61  SRWGLKGAEDLGGGYKTVFRLESGFDASTGKLSQGGLGFGRQAYVGLESPYGTVTLGRQY 120

Query: 116 DSVVDYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGG 175
           DSVVD +GPLEAGDQWGGYIAAHPGDIDNFNN +RTNN +KYTS  + G  FGG YS GG
Sbjct: 121 DSVVDNLGPLEAGDQWGGYIAAHPGDIDNFNNQFRTNNAIKYTSKAFAGFRFGGMYSLGG 180

Query: 176 IAGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAA-VTSPIY 234
           +AG+VT NQ++S G  Y NGPLV+   YLNAR  A AG   N+ S    P+ + + SP+Y
Sbjct: 181 VAGDVTRNQVYSFGGQYANGPLVVAAAYLNARN-ANAGFFGNSTSGTVNPSISNLPSPVY 239

Query: 235 AGFTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNAELNFK 294
            G+ SA+TYQVIG G AYTFGAATIG TYSNI+F NLG SY S F+GQ+A FNN E+NFK
Sbjct: 240 NGYGSAHTYQVIGTGAAYTFGAATIGGTYSNIKFYNLGQSYPSAFRGQTAGFNNFEVNFK 299

Query: 295 YQLTPALLVGAAYDYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHALGDTV 354
           YQ TPALLVG AYDY R   ING S A+Y+QG+ GVDYFLSKRTDVYVTGVYQHA G   
Sbjct: 300 YQFTPALLVGVAYDYLRAGSINGFSAAKYNQGSAGVDYFLSKRTDVYVTGVYQHASGYAA 359

Query: 355 -TAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
            +AG A+V A A INGL+GSS  NQFTAR+GIRH F
Sbjct: 360 NSAGTAMVPAVAAINGLTGSSGPNQFTARVGIRHLF 395