Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 381 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  352 bits (902), Expect = e-101
 Identities = 206/401 (51%), Positives = 245/401 (61%), Gaps = 32/401 (7%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRFGL 60
           M K ++      A A  A AQSSVTLYG+IDEGF+   N  G  +Y L SG  QGSR+GL
Sbjct: 1   MNKRIIPALMASALATSAMAQSSVTLYGVIDEGFDYTNNVSGSKVYELQSGFAQGSRWGL 60

Query: 61  RGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSS-QFGTVTLGRQYDSVV 119
           +GTEDLGGGL+A+F LENGF++NNG+LGQGGLMFGRQAYVGL+S  FGTVTLGRQYDSVV
Sbjct: 61  KGTEDLGGGLRAVFQLENGFNLNNGRLGQGGLMFGRQAYVGLTSDSFGTVTLGRQYDSVV 120

Query: 120 DYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGGIAGN 179
           DY+GP+ A   W GY+ +HP D DN +N +R NNTVKYTS  +GGL FGGTYSF   +G 
Sbjct: 121 DYLGPVTANGNWAGYLFSHPYDSDNTDNTFRVNNTVKYTSPLFGGLQFGGTYSFSNDSG- 179

Query: 180 VTSNQIWSLGAGYNNGPLVLGVGYLNARTPAA-AGGLFNTGSTAAAPAAAVTSPIYAGFT 238
             +N+ +S G  Y  G LVL   YL A +P+A AGG  N G                 F 
Sbjct: 180 FANNRQYSAGGTYTVGGLVLAAAYLQANSPSATAGGAINNGGD-------------ENFV 226

Query: 239 SANTYQVIGAGGAYTFGAATIGATYSN------IRFGNLGASYASPFKGQSATFNNAELN 292
            AN  +V GAG +YTFG A +G  Y+N      +  G +GA   +     S  F N E+N
Sbjct: 227 -ANALRVFGAGASYTFGLANVGFAYTNSYVRRPVSSGYVGAITPASGTLSSLRFQNFEVN 285

Query: 293 FKYQLTPALLVGAAYDYTRGAEIN---GNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHA 349
            KYQ TPA  VGA Y YTR  + N   G     Y    +  DY LSKRTDVYV GVYQH 
Sbjct: 286 GKYQFTPAFYVGAMYVYTR-TDFNSSGGQLNPIYQSVGLMGDYLLSKRTDVYVQGVYQHV 344

Query: 350 LGDTVTAGGAVVDATAGINGLSG-SSNQNQFTARIGIRHKF 389
            GD     G V+D  A I G  G SS  NQ   R+ +RHKF
Sbjct: 345 GGDRT---GTVLD-VAYIPGADGVSSGGNQVVVRVALRHKF 381