Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 389 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  372 bits (955), Expect = e-107
 Identities = 204/400 (51%), Positives = 257/400 (64%), Gaps = 22/400 (5%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNS---------GGKHLYNLSSG 51
           MKKSL AL+ LG FA   HAQSSVTLYGI+DEG  INTN+         GG+     S+ 
Sbjct: 1   MKKSLFALSILGTFAATVHAQSSVTLYGIVDEGVMINTNAKNVVKGKNVGGRQFSVDSNA 60

Query: 52  VLQGSRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGL-SSQFGTVT 110
             QGSR+G+RG EDLGGGLKAIFVLE+G +V+ G  GQGG  FGRQAYVGL SS FG+VT
Sbjct: 61  GTQGSRWGIRGAEDLGGGLKAIFVLESGINVSTGAFGQGGTAFGRQAYVGLASSSFGSVT 120

Query: 111 LGRQYDSVVDYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGT 170
           LGRQYDS+ DYVG       +GG    HPGD+DN N+ +R N+T+KY S N+ GLTFGGT
Sbjct: 121 LGRQYDSINDYVGNYGYAAAYGGSTTEHPGDLDNVNHTFRANSTIKYASPNFNGLTFGGT 180

Query: 171 YSFGGIAGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAVT 230
            S GG+AG ++ +  +SLGA Y +GP  +GV Y   + P+A G L N+ + AA   +  +
Sbjct: 181 VSLGGVAGEISQSSGYSLGANYGHGPFGIGVAYELFKNPSALGSLLNSNANAATFNSLNS 240

Query: 231 SPIYAGFTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNAE 290
              Y G   AN+ Q+I  GG+Y FG A IGA YSN ++ N+GA     F G +AT N+ E
Sbjct: 241 G--YLGTKPANSLQIITTGGSYDFGPAKIGAVYSNTKYMNIGA-----FGGATATLNSYE 293

Query: 291 LNFKYQLTPALLVGAAYDYTRGAEINGNSRAQ-YHQGAVGVDYFLSKRTDVYVTGVYQHA 349
           LN  Y+ TPA  V   Y+YT+G  + G+   Q Y+Q ++ +DY LSKRTDVY  G +Q A
Sbjct: 294 LNALYRFTPAFSVSGEYNYTKGNAVRGDLGDQKYNQFSLLLDYALSKRTDVYFLGTFQTA 353

Query: 350 LGDTVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
            G + T   AV D    I GL  SSN +Q  AR+ I HKF
Sbjct: 354 SGTSSTGAAAVAD----IGGLGDSSNNHQAVARVAIHHKF 389