Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 406 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  239 bits (610), Expect = 1e-67
 Identities = 152/407 (37%), Positives = 214/407 (52%), Gaps = 25/407 (6%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGF--------NINTNSGGKHLYNLSSGV 52
           M +   A+AAL +      AQSSVTLYGI+D G         ++ + SGGK   N+ +GV
Sbjct: 7   MTRLACAIAALAS--APVFAQSSVTLYGIVDTGIGYQSSQAPSLGSTSGGKSKVNMINGV 64

Query: 53  LQGSRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQ-FGTVTL 111
             GSRFGL+G EDLG G KAIF LE+GF+   G       MFGRQA+VG+++  +GT+  
Sbjct: 65  WAGSRFGLKGAEDLGAGTKAIFQLESGFNSATGAQQFSNAMFGRQAWVGVTNPTYGTLQA 124

Query: 112 GRQYDSVVDYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTY 171
           GRQY +    + P        G+  AH GD+D  +  YR NN++ YTS    G TF G+Y
Sbjct: 125 GRQYTAYYSMLSPYSPTTWLTGFYGAHAGDVDALDTIYRANNSLVYTSPKLYGFTFSGSY 184

Query: 172 SFGGIAGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAV-T 230
           S GG+ GN+     WS    Y  GP+ L VG++        GG +   ST +   A    
Sbjct: 185 SLGGVPGNLNRGSTWSGAVQYIQGPVGLAVGFMRINNSTLGGGAYGADSTVSNNGAQPGV 244

Query: 231 SPIYAGFTSANTYQVIGAGGAYTFGAA-TIGATYSNIRF-GNLGASYASPFKGQSATFNN 288
           S +  G+ +A   Q     G Y FG    + A YSN+++   +G+S+       +A FN 
Sbjct: 245 SAVTNGYQTAQAQQRFAVTGGYNFGGGWDVSAAYSNVQYIPGVGSSFR-----DTAIFNT 299

Query: 289 AELNFKYQLTPALLVGAAYDYTRGAEING-NSRAQYHQGAVGVDYFLSKRTDVYVTGVYQ 347
             +   ++ T +      Y YTR  + NG  S AQY Q  +   Y LSKRT +Y    +Q
Sbjct: 300 GGVVLHWKPTVSWDFATGYSYTRATKANGITSSAQYQQVNLSEYYSLSKRTGLYALQAFQ 359

Query: 348 HALGDTV-TAG-GAVVDATAGING---LSGSSNQNQFTARIGIRHKF 389
              G+T+ TAG G ++ ATA I      + SS+++QF A +GI H+F
Sbjct: 360 RTNGNTLGTAGSGHIISATATIGDGFQSAPSSSRSQFAAGVGIVHRF 406