Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 384 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  290 bits (741), Expect = 6e-83
 Identities = 177/408 (43%), Positives = 222/408 (54%), Gaps = 43/408 (10%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGF----NINTNSGGKHLYNLSSGVLQGS 56
           M   + A A L  FA  AHAQSSVTLYG+ID G     N  T +G  +L+    GV QGS
Sbjct: 1   MNNKVFAAATLAVFATAAHAQSSVTLYGVIDAGISYVNNSKTATGHDNLFKYDDGVAQGS 60

Query: 57  RFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQ-FGTVTLGRQY 115
           R+GLRGTEDLGGGLKA+FVLE+GF+  NG LGQGG +FGRQAYVGLS    G++T GRQY
Sbjct: 61  RWGLRGTEDLGGGLKALFVLESGFNSGNGTLGQGGALFGRQAYVGLSKDGIGSLTFGRQY 120

Query: 116 DSVVDYVGP--LEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSF 173
               DY+G      G    G  A H  D+D   ++ R NN VK++SAN+ GLTFG  Y F
Sbjct: 121 SFSTDYLGGNYSTGGQTVAGNYAYHINDVDQLTSS-RINNAVKFSSANFAGLTFGAMYGF 179

Query: 174 ----GGIAGNVT------SNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAA 223
               G  AG+ T      S++ +S G  Y NGP  +G  Y + R PA +   F+T     
Sbjct: 180 SNQAGAFAGSPTVGTTAGSSRAYSFGVNYANGPFGVGAAYTDIRFPAQSTPAFST----- 234

Query: 224 APAAAVTSPIYAGFTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQS 283
           A A   T  +          +  G GG YT  AAT+ A Y+N RF         P  G +
Sbjct: 235 AMANVTTGTV-------RDLRTFGVGGRYTIAAATLWALYTNTRF--------EPITGGT 279

Query: 284 ATFNNAELNFKYQLTPALLVGAAYDYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVT 343
            TF   E   KY  TPAL  GA Y Y     ++  +R  ++Q  + VDY LSKRTDVY  
Sbjct: 280 TTFAAYEAGAKYAFTPALTAGAGYTY---MHLSNANRGHWNQADLSVDYALSKRTDVYAL 336

Query: 344 GVYQHALGDTVTAGG--AVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
           G+YQ A G     G   A + ++      SG+ + NQ   R+GIRHKF
Sbjct: 337 GIYQIASGHNAATGDVQAQIGSSTSYFSTSGTGSDNQLAFRVGIRHKF 384