Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 391 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  298 bits (764), Expect = 1e-85
 Identities = 185/404 (45%), Positives = 240/404 (59%), Gaps = 36/404 (8%)

Query: 4   SLLALAALGAFAGVAHAQSSVTLYGIIDEG--FNINTNSGGKH--LYNLSSGVLQGSRFG 59
           ++ A++ + A +G  HAQSSVTLYG+ID G  +  N +  G H  L   +SG + GSRFG
Sbjct: 6   TICAISGVLATSGSVHAQSSVTLYGLIDAGLMYTNNVSKSGSHGALVQATSGNINGSRFG 65

Query: 60  LRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLS-SQFGTVTLGRQYDSV 118
           +RG EDLGGGLKAIFVLENGF+V NGKLGQ G MFGRQAYVGLS +QFG VTLGRQYDS+
Sbjct: 66  MRGAEDLGGGLKAIFVLENGFNVQNGKLGQDGRMFGRQAYVGLSATQFGAVTLGRQYDSL 125

Query: 119 VDYVGPLEA-GDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGGIA 177
           VD+V PL A    +G    AHP D DN N++ R NN VKYTS NY GLTFGG Y+F    
Sbjct: 126 VDFVAPLSATAGTFGDTGFAHPFDNDNLNHSVRINNAVKYTSVNYAGLTFGGMYAFSNNT 185

Query: 178 GNVTSNQIWSLGAGYNNGPLVLGVGYL----NARTPAAAGGLFNTGSTAAAPAAAVTSPI 233
            +   N+ +S G  Y  GPL    GYL    +  T +++ G  + G +AA  +       
Sbjct: 186 -SFAVNRAYSAGVSYAFGPLTAAAGYLQINGSTNTTSSSSGAVDIGESAANGS------- 237

Query: 234 YAGFT-SANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSAT--FNNAE 290
             GF   A+  + +GA   Y FG A +G  Y++ +F     S+     G S T  F+N E
Sbjct: 238 -GGFNLGADVQRTVGAALNYKFGPAAVGFVYTHSQFQGT-TSFGQTNVGNSGTMRFDNYE 295

Query: 291 LNFKYQLTPALLVGAAYDYTRGAEINGNSRA-----QYHQGAVGVDYFLSKRTDVYVTGV 345
           LN KY LTPA+ +G A  YT G   NG++ A     +++Q  +   Y LSKRTDVYV G+
Sbjct: 296 LNAKYALTPAINLGIADTYTDGHVGNGSNTAYGSDPKWNQVNLQAVYLLSKRTDVYVEGM 355

Query: 346 YQHALGDTVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
           YQH +G       A ++   G +G S     NQ  A +G+R +F
Sbjct: 356 YQHVIGHNYV---AFINTAGGASGTS-----NQVVATVGLRTRF 391