Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 388 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  412 bits (1058), Expect = e-119
 Identities = 225/398 (56%), Positives = 275/398 (69%), Gaps = 19/398 (4%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTN-----SGGKHLYNLSSGVLQG 55
           M  +  ALAA GA A V HAQSSVTLYGIIDEG N  +N       G   YNLSSG+L G
Sbjct: 1   MAFAFAALAAAGAPAAV-HAQSSVTLYGIIDEGINYTSNVQTGPGQGHSQYNLSSGILSG 59

Query: 56  SRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQFGTVTLGRQY 115
           SR+GLRG EDLGGG+KAIFVLE+GFDVN+GK+GQG L+FGRQAYVG+SS +GTVTLGRQY
Sbjct: 60  SRWGLRGNEDLGGGIKAIFVLESGFDVNSGKMGQGSLLFGRQAYVGVSSPYGTVTLGRQY 119

Query: 116 DSVVDYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGG 175
           D VVDY+ PL     + G I AHPGD+DN NN  R NN VKY +A+YGGLT  G YSFGG
Sbjct: 120 DPVVDYIHPLMPSAMFSGSIGAHPGDLDNLNNTNRVNNAVKYRTASYGGLTAEGMYSFGG 179

Query: 176 IAGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAVTSPIYA 235
           + G++  NQI+SLGAGY  GPL +GVGYLNAR P A+      G+TAA      +SP+  
Sbjct: 180 VPGSMAGNQIYSLGAGYARGPLTVGVGYLNARNPNASFFGTAVGATAATNNFG-SSPVIN 238

Query: 236 GFTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFK----GQSATFNNAEL 291
           G+ SA++ ++I AG  Y  GAAT+G  YSN +F +L  +  SP      G +A+FN+AE+
Sbjct: 239 GYASAHSEEIISAGATYVIGAATLGGIYSNTKFKHLSGA-VSPLNPAGVGGTASFNSAEV 297

Query: 292 NFKYQLTPALLVGAAYDYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHALG 351
           N +YQLTPAL  GAAY+YT G + N    A+Y QG++  DY +SKRTD Y+ GV QHA G
Sbjct: 298 NLQYQLTPALSFGAAYNYTDGGDAN---HAKYQQGSLSADYIVSKRTDFYLIGVLQHASG 354

Query: 352 DTVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
            T + G A   A A +NGL+ +S   Q T R  IRHKF
Sbjct: 355 -TDSTGRA---ARASLNGLTPASGNQQATVRFAIRHKF 388