Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 383 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  278 bits (710), Expect = 2e-79
 Identities = 183/404 (45%), Positives = 229/404 (56%), Gaps = 36/404 (8%)

Query: 1   MKKSLLALAAL-GAFAGVAHAQSSVTLYGIIDEG--FNINTNSGGKH--LYNLSSGVLQG 55
           MKK   A+AA  G  A  AHAQSSVTLYG+ID G  +  N   GG    L   +SG + G
Sbjct: 1   MKKISAAVAAFAGLAAATAHAQSSVTLYGLIDAGVMYTNNVKKGGSQGALVQATSGNING 60

Query: 56  SRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSS-QFGTVTLGRQ 114
           SRFGLRG EDLGGGL+AIFVLENG+++ NGKLGQ G +FGRQA+VGLSS Q+GT TLGRQ
Sbjct: 61  SRFGLRGAEDLGGGLQAIFVLENGYNLQNGKLGQNGRLFGRQAFVGLSSKQYGTFTLGRQ 120

Query: 115 YDSVVDYVGPLE-AGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSF 173
           YDS+VD+V PL      +G    AHP D DN N++ R +N VKY SANY GL FGG Y+F
Sbjct: 121 YDSLVDFVAPLSGTAGTFGDTGFAHPFDNDNLNHSVRMSNAVKYASANYAGLKFGGMYAF 180

Query: 174 GGIAGNVTSNQIWSLGAGYNNGPLVLGVGYL---NARTPAAAGGLFNTGSTAAAPAAAVT 230
               G    N+ +S G  Y NGP     GYL    + + A   G  + G +AA       
Sbjct: 181 SNNTG-FAVNRAYSAGVSYANGPFKAAAGYLQINGSNSSANTAGAVDLGESAANGT---- 235

Query: 231 SPIYAGF-TSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNA 289
                GF   A+  +  GA  +Y FG  T G  Y++ +F N  +  A+     S  F+N 
Sbjct: 236 ----GGFQLGADVQRTAGAALSYGFGPVTAGFVYTHSQFQNTASFGAT---HGSMRFDNY 288

Query: 290 ELNFKYQLTPALLVGAAYDYTRGAEINGNSR----AQYHQGAVGVDYFLSKRTDVYVTGV 345
           E+N KY +TPAL +GAAY +T  A + G S      +++Q  +   Y LS RTDVY   +
Sbjct: 289 EVNGKYAMTPALSLGAAYTFT-DAHVGGTSSFGADPKWNQMNLQAVYSLSLRTDVYAEAM 347

Query: 346 YQHALGDTVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
           YQH  G   TA       TAG      SS  NQ    +GIR +F
Sbjct: 348 YQHVSGKGYTA----FINTAG----GASSTGNQVVGTVGIRTRF 383