Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 399 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  264 bits (675), Expect = 3e-75
 Identities = 163/402 (40%), Positives = 224/402 (55%), Gaps = 19/402 (4%)

Query: 3   KSLLALAALGAFAGVAHAQSSVTLYGIIDEGF-------NINTNSGGKHLYNLSSGVLQG 55
           K  LA +ALG  A  AHAQSSVTLYGI+D G        ++ + SGG+ +  + +G+  G
Sbjct: 2   KKALATSALGLVALGAHAQSSVTLYGIVDTGIGYQSSQTSLGSTSGGRSVVKMVNGIWAG 61

Query: 56  SRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLS-SQFGTVTLGRQ 114
           SRFGL+G EDLGGG KAIF LE GF+   G     GL F RQAYVG++ S +GT T GRQ
Sbjct: 62  SRFGLKGAEDLGGGTKAIFQLEEGFNSATGAQSVSGLGFNRQAYVGVTNSSYGTFTAGRQ 121

Query: 115 YDSVVDYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFG 174
           Y S    + P        G   AHPGDID+ +  YR NN++ YT+ ++ GLT  G+Y+ G
Sbjct: 122 YTSYYTMLSPYSPTTWLTGAYGAHPGDIDSLDTVYRVNNSLVYTTPSFYGLTASGSYALG 181

Query: 175 GIAGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAV-TSPI 233
           G+AG+  +   WS G  Y NGP  +  G+       + GG +   STA+   A    S I
Sbjct: 182 GVAGSFNAGSTWSAGLQYLNGPFGIAAGFQRINNSTSGGGAWGADSTASNNGAQPGVSGI 241

Query: 234 YAGFTSANTYQVIGAGGAYTFGAA-TIGATYSNIRFGNLGASYASPFKGQSATFNNAELN 292
             G+  A   Q     G Y F  +  +  +YSN+++        SPF+  +A FN     
Sbjct: 242 NNGYQRAQAQQRFAVTGGYAFSPSWDVSFSYSNVQY---IPGINSPFR-TTAIFNTGGAV 297

Query: 293 FKYQLTPALLVGAAYDYTRGAEING-NSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHALG 351
             ++   +L + A Y YTR  E NG +S A+Y Q  +   Y LSKRT +Y    YQ A G
Sbjct: 298 LHFKPVTSLDLAAGYSYTRATEANGISSSARYQQFNLSQYYSLSKRTGLYALEAYQRASG 357

Query: 352 DTV-TAGGAVVDATAGI-NGLSG--SSNQNQFTARIGIRHKF 389
            T+ T G ++++ATA I +G +G  SS+++QF A +GI HKF
Sbjct: 358 QTLGTNGVSIINATADIGDGQNGAPSSSRSQFAAGVGIIHKF 399