Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 397 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  325 bits (834), Expect = 1e-93
 Identities = 187/403 (46%), Positives = 243/403 (60%), Gaps = 20/403 (4%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNS--------GGKHLYNLSSGV 52
           MKK  +A   L +FAG+A AQS+V LYGI+D G +  +N          G      +SG 
Sbjct: 1   MKKQWIAAPLLMSFAGIASAQSAVVLYGIVDAGVSYRSNERTGTTGNYSGHSNVAATSGN 60

Query: 53  LQGSRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSS-QFGTVTL 111
           L GSR+G++G EDLGGG  A+F LE+GFD+ NGK GQ G +FGRQAYVG+ S Q+GT+TL
Sbjct: 61  LSGSRWGIKGQEDLGGGWNALFQLEDGFDITNGKTGQNGGLFGRQAYVGVGSKQYGTITL 120

Query: 112 GRQYDSVVDYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTY 171
           GRQY S+ D+V P+      GGY  AHPGDID+ +   R NN++KYTSANY G TFG  Y
Sbjct: 121 GRQYTSLNDFVSPVAPVAMVGGY-GAHPGDIDDLDQTARVNNSIKYTSANYAGFTFGALY 179

Query: 172 SFGGIAGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAVTS 231
            FGG  G++     WS+GA Y NGPL +GVG+  +            G           S
Sbjct: 180 GFGGQPGSLKQQNTWSVGAAYGNGPLHVGVGFERSDNSKTGARDTTYGKWNGTDDGLFNS 239

Query: 232 PIYAGFTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNAEL 291
            I  G+ SA + Q+I  G  Y FG A +G  YSN+++ + GA   S FKG  ATFN A +
Sbjct: 240 SINEGYASAQSQQIIATGATYNFGPAIVGVNYSNVQYRS-GAD--SLFKGH-ATFNIAGV 295

Query: 292 NFKYQLTPALLVGAAYDYTRGAEING-NSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHAL 350
             ++ + PA+ + A Y YTRG E++G + RAQYH   +G  Y LSKR+ VY+ G YQHA 
Sbjct: 296 FGQWTIRPAVQLFAGYSYTRGGEVDGVDERAQYHNVTLGGQYALSKRSTVYLMGGYQHAS 355

Query: 351 GDTVTAGGAVVDATAGI----NGLSGSSNQNQFTARIGIRHKF 389
           G T+ A G  V ATA +    NG S S+ Q+Q    IG+RHKF
Sbjct: 356 GGTLDALGNPVAATASVSDKGNGHS-SAAQSQAIVSIGVRHKF 397