Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 393 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  310 bits (794), Expect = 5e-89
 Identities = 184/396 (46%), Positives = 229/396 (57%), Gaps = 19/396 (4%)

Query: 4   SLLALAALGAFAGVAHAQSSVTLYGIIDEGFN-----INTNSGGKHLYNLSSGVLQGSRF 58
           S L+LA L A  GVAHAQSSVTLYG+IDE        ++TN    +   L  G LQG RF
Sbjct: 7   STLSLALLSA-TGVAHAQSSVTLYGLIDESIQYAHNTVDTNGKNSNQVGLVGGNLQGPRF 65

Query: 59  GLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLS-SQFGTVTLGRQYDS 117
           GL+GTEDLGGGLKAIF LENGFDVN GKLGQGG MFGRQAYVGL+  Q+GT TLGRQYD 
Sbjct: 66  GLKGTEDLGGGLKAIFQLENGFDVNTGKLGQGGRMFGRQAYVGLTGDQWGTFTLGRQYDP 125

Query: 118 VVDYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGGIA 177
           +VD V PL A D + G     PGD+DN +N+ RTN+ +KYTS  + G  F G Y+ GG+A
Sbjct: 126 LVDLVQPLTA-DNYFGSTFTTPGDVDNNDNSSRTNSAIKYTSPVWSGFQFEGMYALGGVA 184

Query: 178 GNVTSNQIWSLGAGYNNGPLVLGVGYL---NARTPAAAGGLFNTGSTAAAPAAAVTSPIY 234
           G   S Q WS  A Y  GP  +  GY    N  T A+       G   +       + + 
Sbjct: 185 GATGSGQSWSGAATYATGPFSVAAGYFRLDNGNTLASRTSAGAVGWNGSTSDGTFDNQVN 244

Query: 235 AGFTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNAELNFK 294
             + +A +  +      Y  G  T    YSN ++       A+   G +  +N       
Sbjct: 245 GAYAAAKSIGIASVAVQYVAGPFTANLRYSNAQY----KPDANSGFGSTEKYNIGGAYLG 300

Query: 295 YQLTPALLVGAAYDYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHALGDTV 354
           YQ TPA+LVG  Y YT+    +G+S A YHQ ++G DY LSKRTDVY+ G YQHA G   
Sbjct: 301 YQATPAMLVGVGYIYTKA---SGDSSATYHQVSLGGDYNLSKRTDVYLVGAYQHASGQQR 357

Query: 355 TAGGAVVDATAGINGLS-GSSNQNQFTARIGIRHKF 389
           T+GG +VDA A I      S++ +Q    +GIRHKF
Sbjct: 358 TSGGGLVDAGAAIGSYGYNSASSSQELVSLGIRHKF 393