Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 383 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  317 bits (813), Expect = 3e-91
 Identities = 183/400 (45%), Positives = 240/400 (60%), Gaps = 28/400 (7%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRFGL 60
           MKK+L+A   L A A  AHAQSSVTLYG +D G   + N GG   +   SG +  + FGL
Sbjct: 1   MKKTLIAAGLLSAVAISAHAQSSVTLYGTLDAGLVYSNNQGGHSNWQQGSGSVSNTYFGL 60

Query: 61  RGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGL-SSQFGTVTLGRQYDSVV 119
           RG+ED GGGL AIF LENGF++NNG+  +   MF RQA+VGL S Q+G +TLGRQYDSVV
Sbjct: 61  RGSEDFGGGLHAIFTLENGFNLNNGQNTESNTMFNRQAFVGLQSDQYGALTLGRQYDSVV 120

Query: 120 DYVGPL-EAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGGIAG 178
           DY+ PL EAG  +G  +AAHP D DN +N++   N VKYTSANY GL FGG Y F   AG
Sbjct: 121 DYLAPLSEAGAGYGNNLAAHPLDNDNLDNSFSIKNAVKYTSANYAGLKFGGLYGFSNSAG 180

Query: 179 NVTSNQIWSLGAGYNNGPLVLGVGY--LNARTPAAAGGLFNTGSTAAAPAAAVTSPIYAG 236
           + ++N+ WS+GA Y+NGPL +   Y  LN    +   G  + G   AA A          
Sbjct: 181 DFSNNRAWSVGASYDNGPLSVAAAYLQLNQSGSSNLSGAVSQGDGTAAVA---------- 230

Query: 237 FTSANTYQVIGAGGAYTFGAATIGATYSNIRFG-----NLGASYASPFKGQSATFNNAEL 291
              AN  +  GAG  YT+G AT+G  Y++ +       ++G +      G +   +N E+
Sbjct: 231 ---ANLQRTYGAGINYTYGPATVGFVYTHTQLDGITGVDVGGTTLPGVAGTNLHLDNYEV 287

Query: 292 NFKYQLTPALLVGAAYDYTRG--AEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHA 349
           N +Y LTP L + A+Y +T G  +  NG+   ++H  ++  DY LSKRTDVYV GVYQHA
Sbjct: 288 NGRYALTPDLSLAASYTFTDGKMSGSNGSGDPKWHTVSLQGDYSLSKRTDVYVEGVYQHA 347

Query: 350 LGDTVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
            G+    G  V    A IN L+ SS  NQ  A +G+RH+F
Sbjct: 348 SGELGNFGSNV----AAINTLAPSSTGNQVAAAVGLRHRF 383